KEGG   Manihot esculenta (cassava): 110620663
Entry
110620663         CDS       T05761                                 
Name
(RefSeq) UBP1-associated protein 2B
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
mesc  Manihot esculenta (cassava)
Pathway
mesc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110620663
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mesc03019]
    110620663
   03041 Spliceosome [BR:mesc03041]
    110620663
Messenger RNA biogenesis [BR:mesc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     110620663
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     110620663
Spliceosome [BR:mesc03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    110620663
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 110620663
NCBI-ProteinID: XP_021620164
LinkDB
Position
8:10238460..10244877
AA seq 475 aa
MAKKRKQDSKVTEPTEPPKKQQQKQKQKEEIMELVPEEEEYEEVEEEEEDGEEEEEVEEE
EEEEEEEEEEEDDDDGDDQNQIDDEDDESLDKLLEPFSKEQLINLIRYAADTHGDIADRI
RKIADEDPVHRKIFVHGLGWDTNTETLMNAFKPYGEIEDCKAVCDKVSGKSKGYGFILFK
KRSGASKALKEPQKKIGNRMTACQLASIGPVPAAGAATPAHQQVSEYTLRKIYVSNVGSD
LDPQKLTAFFAKYGEIEEGPLGLDKATGKPKGFSLFVYRTVESAKKALEEPHKNFEGHIL
HCQKAIDGPKPGKSMQQQQQQQQHHVQNSHFQRNDNPAYAGGVASGPAHLMAPSAAPGIG
FNQGAGAAAAPALNPALGQALTALLATQGAGLGLTNLLGTLGSAASVNQGGVPGAAPGMQ
SAYGSQANISPGVIGSYGNQGVMQGGYSNQQLGQGGSGRGHGVGQYGGVAPYMGH
NT seq 1428 nt   +upstreamnt  +downstreamnt
atggcaaagaagagaaagcaggattccaaagtcaccgaaccaaccgaacctccaaaaaag
cagcaacaaaaacagaagcagaaagaagaaattatggaactcgttccggaagaagaagaa
tatgaggaagttgaagaagaggaggaagatggagaagaagaggaagaggtggaagaagaa
gaagaagaagaagaagaagaagaagaggaagaagatgatgatgatggcgatgatcagaat
cagatcgacgatgaagatgatgaatctctagataagcttcttgaaccgttcagtaaagag
cagttaatcaatttgatacgttatgcagctgatactcacggagatattgcagatcgtata
cgtaagatagccgatgaggatcccgtgcaccgcaagatctttgtacacggccttggctgg
gatacgaacaccgagactctcatgaatgccttcaagccttacggggagatcgaggattgc
aaggcggtgtgcgacaaggtctccggtaaatccaagggctatgggttcatccttttcaag
aagcgaagtggcgctagcaaggccctaaaggaacctcagaagaagattggcaatcggatg
acagcttgccagctcgcttccattggccctgtcccagccgctggtgcagccactcctgca
catcagcaggtgtctgagtatactctgaggaagatttatgtgagcaatgttggttcggat
ttggatccgcagaagctgactgccttctttgccaagtatggggaaattgaggaaggtcca
ttgggactagacaaggcgactggtaagcccaagggattttctttgtttgtgtataggacc
gttgagagtgccaagaaggcacttgaagagccacacaaaaacttcgagggtcacatttta
cattgccagaaagcaattgatgggcctaaaccaggtaaatctatgcagcaacagcagcag
cagcagcagcatcatgtgcagaactcgcattttcagagaaatgataatcctgcttatgct
ggtggagttgcttcagggccagcccatttgatggcaccttctgccgcacctgggattggt
tttaaccaaggtgcaggagctgcagcggcacctgctttgaaccctgcactcggacaggca
ctaactgccttgcttgcgactcagggtgctggattaggcctcactaatctgctagggact
ctgggctctgcagcttctgttaaccagggtggtgtgcctggtgcagcacctggaatgcag
agtgcatatggtagccaagcaaatataagccctggagtgattggatcatatggaaatcag
ggagtgatgcagggtggatactcaaatcagcagctgggccaaggtggttctggaagaggg
catggtgttgggcaatatggtggtgttgcgccttacatgggtcactag

DBGET integrated database retrieval system