KEGG   Manihot esculenta (cassava): 110620691
Entry
110620691         CDS       T05761                                 
Name
(RefSeq) cell division cycle protein 48 homolog
  KO
K13525  transitional endoplasmic reticulum ATPase
Organism
mesc  Manihot esculenta (cassava)
Pathway
mesc04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    110620691
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mesc03019]
    110620691
   03009 Ribosome biogenesis [BR:mesc03009]
    110620691
   04131 Membrane trafficking [BR:mesc04131]
    110620691
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mesc04147]
    110620691
Messenger RNA biogenesis [BR:mesc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     110620691
Ribosome biogenesis [BR:mesc03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    110620691
Membrane trafficking [BR:mesc04131]
 SNARE
  SNARE associated proteins
   Others
    110620691
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    110620691
Exosome [BR:mesc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   110620691
SSDB
Motif
Pfam: AAA AAA_lid_3 CDC48_N RuvB_N AAA_16 CDC48_2 AAA_2 AAA_22 AAA_5 AAA_33 AAA_14 TIP49 NPHP3_N RNA_helicase nSTAND3 AAA_28 AAA_17 Mg_chelatase ATPase_2 AAA_18 Parvo_NS1 IstB_IS21 Viral_helicase1 ABC_tran NACHT AAA_7 Vps4_C NB-ARC AAA_24 TsaE AAA_lid_PRS2_C DUF815 Zeta_toxin Sigma54_activat Sigma54_activ_2 Zot
Other DBs
NCBI-GeneID: 110620691
NCBI-ProteinID: XP_021620203
LinkDB
Position
8:complement(1193929..1199570)
AA seq 805 aa
MSNQAESSDSKGTKRDFSTAILERKKAPNRLVVDEATNDDNSVVSLHPDTMEKLQLFRGD
TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVH
ILPIDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPAEYCV
VAPDTEIFCEGEPVRREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLERIAKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDESIDAEILNSMAVSNEHFQTALGTSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQI
FKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERKRREN
PEAMEEDVEDDVAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFSE
ASGAATGSDPFAASAGGADDDDLYN
NT seq 2418 nt   +upstreamnt  +downstreamnt
atgtctaaccaagccgaatcctctgactctaagggaacgaagagggattttagtactgcg
attttggagcgcaagaaggcgccgaatcggctcgttgttgatgaggctaccaatgatgat
aactcggttgtctcgctccaccccgacaccatggagaagctccagctttttcggggtgac
acgatcttaattaagggtaagaaaaggaaagatacaatctgcattgcacttgctgatgac
acatgtgatgagccaaagatcaggatgaataaggttgtgaggtcaaaccttagggttagg
cttggagatgttgtctctgtgcaccaatgtcccgatgtcaaatatggaaagcgtgttcac
atactgcctatagatgacacaattgaaggggtcactggaaatctctttgatgcatacttg
aagccttacttcctggaggcatatcgcccagtcaggaagggtgatctcttccttgtgaga
gggggaatgagaagtgtcgagttcaaggttattgagacggaccctgcagagtactgtgtg
gttgccccagacactgagattttctgtgagggagagccagtaaggcgggaagatgaaaat
agattggatgaagttggctatgatgatgttggtggtgttagaaaacagatggctcagatt
cgggagttggtggagcttccacttagacatccacagctattcaaatcaattggtgtgaag
ccaccaaaaggaattttgctttatggacctcctggttctgggaagacactaattgcccgg
gctgttgccaacgaaactggtgctttcttcttctgtattaatggacctgagattatgtcc
aaattggctggtgagagtgaaagcaatctcagaaaagcttttgaggaagcagagaagaat
gcaccatccattatttttattgatgagattgattcaattgctcccaagcgggagaagaca
catggagaagttgagaggaggatagtctctcagctattgacacttatggatggacttaaa
tcccgtgcacatgttattgttattggggccacaaaccgtcccaacagcatagacccagct
ttgagaaggtttggtagatttgatagggaaattgatattggtgttcctgatgaagttgga
cgtcttgaggttcttcgaatccatactaagaatatgaagcttgctgaagatgttgattta
gaaagaattgccaaagacacacatggttatgttggtgctgatttagctgctctttgcact
gaggctgcacttcagtgcatcagggagaagatggatgtgatcgacttggaagatgagtca
atagatgctgagatacttaactctatggcagttagtaatgaacacttccaaactgcactt
ggaacaagcaacccatctgccctgcgtgaaacagttgttgaagtacctaatgtgagctgg
gaagatattggaggtctggagaatgttaagcgagaacttcaagagactgtccaatatcca
gtggagcatcctgagaaatttgagaagtttggaatgtcaccctctaagggggttcttttc
tacggccctcctggatgtgggaaaactcttctggcaaaagctattgccaatgagtgccag
gcaaatttcatcagtgtcaagggtcctgagttgcttacaatgtggtttggtgagagtgaa
gccaatgtgagagagatttttgataaggctcgccaatctgctccttgtgtcctcttcttt
gatgaacttgactcaattgctactcagagaggaagtagtgtaggggatgccggaggtgct
gctgatagggttttgaaccagcttctgacggagatggatggtatgtctgcaaagaaaact
gtttttataattggagccactaatagaccagacatcatagatcctgcacttctgcgtcct
ggccgtcttgatcagctgatttacatccctcttcctgatgaggattctcgtcatcaaatt
ttcaaagcttgcttgaggaaatcgccagtttccaaagatgttgacctcagagctcttgcc
aagtatactcagggcttcagtggtgccgatattactgagatttgccagcgtgcttgcaaa
tatgctattagagagaacattgaaaaggatattgagagggagaggaagcgtagagagaac
ccagaagcaatggaggaagatgttgaggatgatgtggcagagattaaagcagcacatttt
gaggagtcaatgaagtatgcccgcaggagtgtgagcgacgctgacatccgcaaataccag
gcatttgctcaaactttgcaacagtcgagaggctttggaactgaattcaggttttctgaa
gccagtggtgcagctactggaagtgatccttttgcggcttctgcagggggggctgatgat
gatgacctttacaattaa

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