Manihot esculenta (cassava): 110620691
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Entry
110620691 CDS
T05761
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110620691
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesc03019
]
110620691
03009 Ribosome biogenesis [BR:
mesc03009
]
110620691
04131 Membrane trafficking [BR:
mesc04131
]
110620691
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mesc04147
]
110620691
Messenger RNA biogenesis [BR:
mesc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
110620691
Ribosome biogenesis [BR:
mesc03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
110620691
Membrane trafficking [BR:
mesc04131
]
SNARE
SNARE associated proteins
Others
110620691
Autophagy
Aggrephagy
Other aggrephagy associated proteins
110620691
Exosome [BR:
mesc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
110620691
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_2
AAA_22
AAA_5
AAA_33
AAA_14
TIP49
NPHP3_N
RNA_helicase
nSTAND3
AAA_28
AAA_17
Mg_chelatase
ATPase_2
AAA_18
Parvo_NS1
IstB_IS21
Viral_helicase1
ABC_tran
NACHT
AAA_7
Vps4_C
NB-ARC
AAA_24
TsaE
AAA_lid_PRS2_C
DUF815
Zeta_toxin
Sigma54_activat
Sigma54_activ_2
Zot
Motif
Other DBs
NCBI-GeneID:
110620691
NCBI-ProteinID:
XP_021620203
LinkDB
All DBs
Position
8:complement(1193929..1199570)
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AA seq
805 aa
AA seq
DB search
MSNQAESSDSKGTKRDFSTAILERKKAPNRLVVDEATNDDNSVVSLHPDTMEKLQLFRGD
TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVH
ILPIDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPAEYCV
VAPDTEIFCEGEPVRREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLERIAKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDESIDAEILNSMAVSNEHFQTALGTSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQI
FKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERKRREN
PEAMEEDVEDDVAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFSE
ASGAATGSDPFAASAGGADDDDLYN
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaccaagccgaatcctctgactctaagggaacgaagagggattttagtactgcg
attttggagcgcaagaaggcgccgaatcggctcgttgttgatgaggctaccaatgatgat
aactcggttgtctcgctccaccccgacaccatggagaagctccagctttttcggggtgac
acgatcttaattaagggtaagaaaaggaaagatacaatctgcattgcacttgctgatgac
acatgtgatgagccaaagatcaggatgaataaggttgtgaggtcaaaccttagggttagg
cttggagatgttgtctctgtgcaccaatgtcccgatgtcaaatatggaaagcgtgttcac
atactgcctatagatgacacaattgaaggggtcactggaaatctctttgatgcatacttg
aagccttacttcctggaggcatatcgcccagtcaggaagggtgatctcttccttgtgaga
gggggaatgagaagtgtcgagttcaaggttattgagacggaccctgcagagtactgtgtg
gttgccccagacactgagattttctgtgagggagagccagtaaggcgggaagatgaaaat
agattggatgaagttggctatgatgatgttggtggtgttagaaaacagatggctcagatt
cgggagttggtggagcttccacttagacatccacagctattcaaatcaattggtgtgaag
ccaccaaaaggaattttgctttatggacctcctggttctgggaagacactaattgcccgg
gctgttgccaacgaaactggtgctttcttcttctgtattaatggacctgagattatgtcc
aaattggctggtgagagtgaaagcaatctcagaaaagcttttgaggaagcagagaagaat
gcaccatccattatttttattgatgagattgattcaattgctcccaagcgggagaagaca
catggagaagttgagaggaggatagtctctcagctattgacacttatggatggacttaaa
tcccgtgcacatgttattgttattggggccacaaaccgtcccaacagcatagacccagct
ttgagaaggtttggtagatttgatagggaaattgatattggtgttcctgatgaagttgga
cgtcttgaggttcttcgaatccatactaagaatatgaagcttgctgaagatgttgattta
gaaagaattgccaaagacacacatggttatgttggtgctgatttagctgctctttgcact
gaggctgcacttcagtgcatcagggagaagatggatgtgatcgacttggaagatgagtca
atagatgctgagatacttaactctatggcagttagtaatgaacacttccaaactgcactt
ggaacaagcaacccatctgccctgcgtgaaacagttgttgaagtacctaatgtgagctgg
gaagatattggaggtctggagaatgttaagcgagaacttcaagagactgtccaatatcca
gtggagcatcctgagaaatttgagaagtttggaatgtcaccctctaagggggttcttttc
tacggccctcctggatgtgggaaaactcttctggcaaaagctattgccaatgagtgccag
gcaaatttcatcagtgtcaagggtcctgagttgcttacaatgtggtttggtgagagtgaa
gccaatgtgagagagatttttgataaggctcgccaatctgctccttgtgtcctcttcttt
gatgaacttgactcaattgctactcagagaggaagtagtgtaggggatgccggaggtgct
gctgatagggttttgaaccagcttctgacggagatggatggtatgtctgcaaagaaaact
gtttttataattggagccactaatagaccagacatcatagatcctgcacttctgcgtcct
ggccgtcttgatcagctgatttacatccctcttcctgatgaggattctcgtcatcaaatt
ttcaaagcttgcttgaggaaatcgccagtttccaaagatgttgacctcagagctcttgcc
aagtatactcagggcttcagtggtgccgatattactgagatttgccagcgtgcttgcaaa
tatgctattagagagaacattgaaaaggatattgagagggagaggaagcgtagagagaac
ccagaagcaatggaggaagatgttgaggatgatgtggcagagattaaagcagcacatttt
gaggagtcaatgaagtatgcccgcaggagtgtgagcgacgctgacatccgcaaataccag
gcatttgctcaaactttgcaacagtcgagaggctttggaactgaattcaggttttctgaa
gccagtggtgcagctactggaagtgatccttttgcggcttctgcagggggggctgatgat
gatgacctttacaattaa
DBGET
integrated database retrieval system