Manihot esculenta (cassava): 110620737
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Entry
110620737 CDS
T05761
Name
(RefSeq) ubiquitin C-terminal hydrolase 12 isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
110620737
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mesc01002
]
110620737
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mesc04121
]
110620737
Enzymes [BR:
mesc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
110620737
Peptidases and inhibitors [BR:
mesc01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
110620737
Ubiquitin system [BR:
mesc04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
110620737
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
USP7_C2
UCH
MATH
UCH_1
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
110620737
NCBI-ProteinID:
XP_021620268
LinkDB
All DBs
Position
8:complement(3773993..3785991)
Genome browser
AA seq
1116 aa
AA seq
DB search
MTMMTPPPLDQEDEEMLVPHSDLVEGPQPMEVVAQVESASTVENQPVEDPPSMKFSWTIQ
NFSRLNTKKHYSDVFIVGGYKWRILIFPKGNNVDHLSMYLDVADSATLPYGWSRYAQFSL
AVVNQIHNKYSIKKDTQHQFNGRESDWGFTSFMPLSDLYDPSRGYLVNDIVVVEAEVAVR
KVLDYWSYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPTGSI
PLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVV
EGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGD
NKYHAEEHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDRE
NGKYLSPEADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWFKFDDERVTKEDMK
RALEEQYGGEEELPQTNPGFNNAPFKFTKYSNAYMLVYIRECDKDKIICNVDEKDIAEHL
RIRLKKEQEEKEDKRRYKAQAHLYTIIKVARDEDLKEQIGRDIYFDLVDHDKVRNFRIQK
QTPFSHFKEEVTKEFGVPVQFQRFWIWAKRQNHTYRPNRPLTPQEEAQSVGQLREVSNKA
HTAELKLFLEVELGQDLRPIAPPDKTKEDILLFFKLYDPEKGELRYVGRLFVKSSGKPME
ILAKLNQMAGFAPDEEIELYEEIKFDPCVMCEHLDKRTSFRLSQIEDGDIICFQKSPPLE
GEEDCRYPDVPSFLEYVHNRQVVHFRSLEKPKEDDFCLELSKLHTYDDVVERVAQQIGLD
DPSKIRLTSHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVLDIPLPELQGLK
NLKVAFHHATKDEVVIHNIRLPKQSTVGDVINELKTKVELSHPNAELRLLEVFYHKIYKI
FPPNEKIENINDQYWTLRAEEIPEEEKNLGPHDRLIHVYHFTKETAQNQMQVQNFGEPFF
LVIHEGETLAEVKARIQKKLQVPDEDFSKWKFAFLSLGRPEYLQDSDIVFTRFQRRDVYG
AWEQYLGLEHSDNTPKRSYAVNQNRHTFEKPVKIYN
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgactatgatgactcctccaccgttagatcaagaagacgaggagatgctcgtaccgcat
tcagatttggttgagggtccacagcctatggaagtagtagcacaagtggagtcagctagt
accgtggagaatcagccagtggaggatcctccatccatgaaattctcatggacaattcag
aatttctctaggttgaacactaagaagcactattcagatgtattcatcgttggcggttac
aaatggcggatactaatttttcccaagggaaacaatgtggatcacttgtctatgtatttg
gatgtagctgattctgccacattgccatatggatggagtagatacgcacaattcagcttg
gctgtagtcaatcaaattcataacaagtattcaattaaaaaagatacgcagcatcaattt
aatggaagagaaagtgactggggtttcacatcgtttatgcctcttagtgatctttatgat
cccagtagaggataccttgtgaatgatattgttgttgtggaagctgaagttgctgttcgt
aaggttctggattattggtcatatgactcaaagaaggagactgggtatgtaggactgaag
aaccaaggagcaacatgttatatgaactctctcttgcagactctctaccacattccttac
tttaggaaggctgtgtaccacatgccaacaactgaaaatgacatgcctacaggaagcatt
cctttagctctacagagtttattctataagctgcaatataatgacacaagtgttgcaaca
aaggaattgaccaaatcttttggatgggatacgtatgattccttcatgcagcatgatgta
caagaactcaatagggtactgtgtgagaagctagaagataagatgaaggggactgtggtg
gaggggacgatacagcagttatttgagggtcaccatatgaattatatcgagtgtatcaat
gtggattataaatcaacaagaaaagaatcattttacgatctccagcttgatgtaaaaggt
tgtcgggatgtttatgcttcttttgacaagtatgtagaagttgaacgacttgagggtgat
aacaaataccatgctgaagaacacggtttgcaggatgctaagaagggtgtcctatttatt
gactttccccctgttcttcaactccaactgaagaggtttgagtatgactttatgcgagac
actatggtgaagattaatgaccgatatgagtttcctcttcaacttgaccttgacagagag
aatggaaaatatctgtcgccggaagcggacaggagtgttcgtaacctttacacacttcat
agtgtgttggttcatagtggaggggtgcatggtggacattattatgctttcatcaggcca
accctttctgatcaatggttcaaatttgatgatgaacgggtgacaaaggaggatatgaag
agggcactagaagagcagtatggcggtgaggaagagcttccacagaccaatcctggtttt
aataatgctccatttaagttcacaaaatactcaaacgcttacatgctagtttatatacgt
gaatgtgacaaggacaagataatttgtaatgtcgatgaaaaagacattgctgaacacctg
aggattaggttgaagaaagaacaagaagagaaggaagacaagagaagatataaagcacaa
gcccacctttatacaataataaaggttgcacgagacgaggaccttaaagagcagattgga
agggatatatattttgacctggtggatcatgacaaagttcgtaatttccgtatccaaaag
cagacaccgtttagtcattttaaggaggaggttaccaaagaatttggtgtacctgtacag
tttcagcgattttggatatgggcgaagcgtcaaaatcatacataccgtccgaatcgacca
ctaacacctcaagaggaagcacaatcagttggacagctgagggaagtgtcaaataaagca
cacactgcagaattgaagttgttcttggaagtagagcttggacaggatttacgtcctatt
gctcctcctgacaaaactaaagaagatattcttcttttcttcaagctttatgatcctgag
aaaggagaattacgatatgtcggtaggctttttgtgaagagttctggtaaaccaatggaa
atcttggcaaaacttaatcaaatggctggctttgcacctgacgaagagattgaactttat
gaggaaataaagtttgatccctgtgtcatgtgtgaacatcttgataagaggacgtcattt
cgattaagtcagattgaagatggagacataatttgctttcagaaatctcctcctcttgag
ggtgaagaagattgccgctacccagatgtgccttcatttctggaatatgtgcacaatcgg
caggtagttcattttcgttctctagagaaaccaaaagaggatgatttttgtctggagttg
tcaaagctacatacctatgatgatgttgtggaaagagtagctcaacaaattggtttagat
gatccatccaagattaggttaacatctcacaactgttactcccagcagcctaagccccag
ccaattaaatatcgaggagtggatcatctttcagatatgttagttcactataatcagact
tctgatattttgtactatgaagttctggacattcctcttccagaattgcaaggtttgaaa
aatctgaaagttgctttccatcatgctactaaagatgaggtggtaattcataatattaga
ctacctaaacagagcactgtaggggatgtgattaatgaacttaaaacaaaggtggagttg
tctcatccaaatgcagaacttcgtcttcttgaagttttctatcacaagatatacaagatc
tttcctcccaatgaaaaaatcgaaaatataaatgatcagtactggacattgcgtgcagag
gagatcccagaggaagagaaaaatcttggacctcatgatcgcttgattcatgtttatcac
ttcacaaaggagacggctcaaaatcaaatgcaagtacagaattttggggagccatttttc
ttggtcatccatgaaggtgaaactttagctgaagttaaagcacgcattcaaaagaaactg
caggttcctgatgaggacttttctaagtggaaatttgcatttctctcactaggtcgtcca
gagtatctgcaggattctgatatagttttcacccgttttcagagaagagatgtttatggt
gcttgggaacagtaccttgggttggagcattctgacaatacgcccaagaggtcttacgcg
gtaaaccagaaccgtcatacgtttgagaagccagttaaaatatacaattag
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