KEGG   Manihot esculenta (cassava): 110620783
Entry
110620783         CDS       T05761                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RNFT1 isoform X1
  KO
K28516  E3 ubiquitin-protein ligase RNFT2
Organism
mesc  Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mesc04121]
    110620783
Ubiquitin system [BR:mesc04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    110620783
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4_3 zf-C3HC4 zf-C3HC4_2 zf-RING_UBOX zf-rbx1 zf-RING_5 Prok-RING_4 zf-C3HC4_4 zf-RING_6 zf-RING_16 zf-ANAPC11 DUF1451 zf-RING_10 zf-Nse Sina_RING
Other DBs
NCBI-GeneID: 110620783
NCBI-ProteinID: XP_021620337
LinkDB
Position
8:complement(40246253..40251704)
AA seq 486 aa
MMIMVRVRASAQMEASGSNSDVYRGSSGVSNPTNSNSRRNGILSASSIIQAPITALLEYS
GLLRTTSSTHQETDPLINNSAGIHAHRLDDSTATPAAAATANNGEVAIRIIGAGEHEHDR
EGSGLVVGQLGAQSEVSVQQPLAGMESDVQGDSRNDRVSGEGASQQSSSASGDGEVADGS
GANGRDSSYQRYDIQQAARWIEQVLPFSLLLLVVFIRQHLQGVTGFFVTIWIAVVMFKSN
DIVRKQTALKGERKMSVLIGISLAFTLHVVGVYWWYQNDDLLYPLIMLPPKSIPPFWHAI
FIIMVNDTLVRQAAMVFKCILLMYYKNTRGRNYRKQGQMLTLVEYLMLLYRALLPTPVWY
RFFLNKEYGSLFSSLMTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVNA
AGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSYGDGSTT
LFFQIF
NT seq 1461 nt   +upstreamnt  +downstreamnt
atgatgattatggttagggttagggcatctgcgcagatggaagcgtccggtagtaattct
gacgtgtacagaggttcttcgggagtgagtaatccaactaatagtaattcgaggaggaac
ggaattctatcggcttcaagtatcatccaggcaccaataactgctttgttagagtattca
ggtctgctgcgaaccaccagttcaactcaccaagaaacggaccccttgattaacaattcg
gctgggattcatgctcatcgacttgatgattctacagctacaccagcagcagcagccaca
gccaacaatggagaggttgccattaggataattggtgcaggagaacatgagcatgacaga
gaggggtctggattggtggttgggcaattgggtgctcagagtgaggtttctgtgcagcag
ccactggccggaatggaatcggatgttcagggggattctagaaatgatcgtgtctcagga
gaaggtgcttctcagcaatcttccagcgcaagtggggatggggaagttgctgatggcagt
ggagctaatggaagggattcatcttaccaaaggtatgacattcagcaagctgccagatgg
attgagcaggtcctccccttctctttgcttctcttggttgtcttcatccgccagcatttg
caaggagttacaggtttctttgttacaatttggattgccgttgtcatgttcaagtcaaat
gatattgtacgtaaacaaacagctctgaagggagagaggaaaatgtctgtcttgattggc
atctctcttgcattcacacttcatgtggttggtgtctattggtggtatcagaatgatgat
cttttatacccattaattatgctccctcccaaatcaatcccacccttttggcatgcaatt
ttcatcatcatggtgaatgatacattggttcggcaggcagcaatggtgttcaaatgcatt
ctgttaatgtattacaagaacactagaggccggaattatcgtaagcagggtcaaatgcta
actttggttgaatatctgatgctgctataccgtgctttgttgcctacaccagtatggtac
cgtttctttttgaataaagaatatggtagcctcttttcatcactaatgacagggttatac
ttgactttcaagcttacatctgttgtggagaaggtgcaatctttctttgctgctttgaag
gctttatcacgtaaagaggtgcattacggggcttatgcaacatcagagcaggtgaatgca
gcaggagatctgtgcgctatatgccaagagaagatgcatgctccgattctgcttcgttgt
aaacacatcttttgtgaagattgtgtatcagaatggtttgagagggaacggacgtgtccc
ttgtgcagggccttggtcaaacctgcagatctaagatcgtatggtgatggttcaactact
ttgttcttccagatattctaa

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