Manihot esculenta (cassava): 110620988
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Entry
110620988 CDS
T05761
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein Q isoform X1
KO
K13161
heterogeneous nuclear ribonucleoprotein R
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mesc03041
]
110620988
Spliceosome [BR:
mesc03041
]
Complex C
Other components
hnRNP proteins
110620988
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_10
RRM_7
RRM_5
RRM_PARP14_3
RRM_RdRP1_2
RBD_DEAH11
BRAP2
Spo7_2_N
RRM_MARF1
RRM_DEAH11
SpoIIP
Motif
Other DBs
NCBI-GeneID:
110620988
NCBI-ProteinID:
XP_021620643
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Position
8:complement(2555899..2561006)
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AA seq
485 aa
AA seq
DB search
MPRTRGNATAEAADKQDEPENPVESEEGVDLDGDNEQEEIMEEEVEYEEVEEEEEVEEIE
EEEEVEEEVEEEEEIEEDVNEDDAQKGSDSEEEEDDLKKRAELMALPPHGSEVYLGGIPN
DATEEDLKRFCESVGEVTEVRIMKGKDSGEAKGYAFVTFRSKELASKAIEDLNNTELQGK
KIRCSTSQANHRLFIGNVPRSWEEEDMKNVVMKIGPGVISVELLKDPQNTSRNRGFAFIE
YYNHACAEYSRKKMSNPKFKLDDNAPTVSWADPKNAGSSAASQVKAVYVKNLPKDITQDH
LRQLFEHHGKVTKVVLPPAKAGHENSRFGFVHFAERSSAMKALKNTEKYEIDGQVLECSL
AKPQADQKSFGGPNSQKSVLHPTFPPRLGYGLIGGTYGALGAGYGATGFAQPMIYGRGPT
PAGMAMMPMLLPDGRIGYVLQQPGMQPQHTPPPQPRAGRGGGAGSSSGGRRSNDSNRGRS
RYNPY
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgccgagaacaagaggtaatgctactgctgaggctgctgataaacaagatgaacctgaa
aatcctgtggaatctgaagagggggttgaccttgacggtgacaatgaacaggaggaaata
atggaagaagaagttgagtatgaagaagtagaggaagaggaggaagtggaggagatagag
gaagaggaagaggtagaagaggaggtagaagaagaggaagaaattgaggaggatgtgaat
gaggatgatgcacaaaaaggctcagacagtgaggaggaggaagatgatttaaaaaagcgt
gctgaacttatggcacttccgcctcatggatcagaggtgtatcttggtggtattcctaat
gacgccactgaagaggatctcaagcgcttttgtgaatctgtaggggaagtcacagaagta
aggataatgaaaggcaaagattcaggtgaggccaaggggtatgcttttgtaaccttcaga
tcgaaggagttagcttccaaggctattgaagatctgaacaatactgagcttcagggaaag
aagataagatgttcaacatctcaagcaaatcatcggctgtttatcggtaatgttccaaga
agctgggaagaggaagatatgaaaaatgttgttatgaagattgggccaggagtaatttct
gtcgaattgttgaaggacccgcagaacaccagccgaaatcgtggatttgctttcattgag
tattataatcatgcttgtgcagaatactcaagaaaaaagatgtcaaacccaaaatttaaa
cttgatgacaatgctccaacagtgagctgggctgaccctaaaaatgcaggatcatcagct
gcttctcaggtcaaggcagtgtatgtgaagaacttacccaaggacattactcaggatcac
ttaagacagctgtttgaacatcatgggaaagtcacaaaagtggttctccctccagcaaaa
gcagggcatgaaaacagcagatttggttttgtgcactttgcagagaggtccagtgccatg
aaggcattgaagaacactgagaaatatgaaattgatggacaagttttggagtgttccctt
gctaagcctcaagcagatcagaaatcttttggagggccaaattcacagaagtctgtcttg
catccaaccttcccaccccgtcttggatatggtttaattgggggtacctatggtgctcta
ggtgcaggatatggtgctactggctttgcacaaccaatgatctatggtaggggaccaact
cctgctggtatggcaatgatgccgatgcttttacctgatggaaggattggatatgtcctg
caacagcctggaatgcaaccacaacacacccctccaccacagcctcgggctggcaggggt
ggtggtgctggtagctcgagtggtggaagacgtagcaatgacagtaaccgtgggcgcagc
cggtataacccatactaa
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