Manihot esculenta (cassava): 110621036
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Entry
110621036 CDS
T05761
Name
(RefSeq) transcription factor IIIB 60 kDa subunit isoform X2
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mesc03021
]
110621036
Transcription machinery [BR:
mesc03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
110621036
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
BRF2-like_C_cyclin_rpt
Zn_Ribbon_TF
Motif
Other DBs
NCBI-GeneID:
110621036
NCBI-ProteinID:
XP_021620749
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Position
8:39007881..39021772
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AA seq
613 aa
AA seq
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MVFCKACARDVPGIRDGDGLLSCSRCGKVLKFDNYSTEATFVKNASGQSQLAGKLVRSIE
NENFSRQRLYDKAYDDLISIKNGLGMGENLAIVDQAMVYYRIAVERNFTKGRRTEQVQAV
CLYIACRENRKPYLLIDFSNYLRINIYVLGAVFLQLCKVLNLTEHPICQKLLDPSIFIHK
YTASLAGGKNKDISDSALTIIASMNRDWMQTGRRPSGLWGAALYISALSHGLNCSKSDIL
KLVHVCEATLSKRLVEFESTESGSLTIEELNAKAEELKESSTDQSDVMLKTSSSKELLCH
HKGTSRLPHAYGLCNECYAYFIGFEGGMDPPAFQRAERQRKENPSAMDKTVDPNAFEELN
SQHVGRDERLQSTEPQSLGGTAQDMPANDGGYGKFNGEDDTCSKAHDESDNFSDIDDAEV
DGYLHNEEEAKYKKIIWEEMNREYLEEQAAKEAAAAAAKEAWEATFKNCPEDVQAAKKLE
AAVAAAVAKSKKERQQKRAAEARNSAPPQSASEAARQMLTKKRISSKINYDALEKLFDEP
GSKDPKKPRTESHSDDDDKFPHTDNEKDDLGQENKNVDEEDAEAYNYTNDPYYENGEEAY
GYDYNENDDYSVY
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggtgttttgtaaagcctgtgcaagagatgttcctggaattcgtgatggtgatgggctt
ttgtcctgtagcaggtgtggtaaggttctgaaatttgataattattcaactgaagccaca
tttgtaaaaaatgcatcgggacagagccaattggcaggaaagttagtaaggagtattgaa
aatgaaaatttttcaaggcaaaggttatatgataaagcttatgatgatttgataagtata
aaaaatggcttgggcatgggtgaaaatcttgccatagttgaccaagctatggtgtattat
cgaatagcagttgaacgaaatttcactaaaggacgtagaacagagcaagtccaagccgtt
tgtctttacattgcatgtcgggagaacagaaagccatatcttcttattgatttttcgaat
tacttgagaatcaatatttatgtgctaggtgctgtttttttgcagctctgcaaagttttg
aatcttacagaacatcccatttgccagaaacttcttgatccatccatttttattcataaa
tatacagctagtttagcaggaggaaagaataaggatatttctgattctgcactgaccatt
atagctagcatgaatcgtgattggatgcagacagggaggaggcctagtgggttgtggggc
gcagcattatatatatctgcactgtcacatggtctcaactgttctaaatcagacatttta
aagctggtgcatgtttgtgaagcaacactctcaaaacgattggtagaatttgagagtacg
gagtctggcagcttaacgattgaggaactgaatgcaaaagcagaagagcttaaagaaagt
tcaacagatcaatcagatgttatgttgaagacgtcaagctcaaaagagttgctttgtcat
cacaagggtactagtagacttcctcatgcctatggtctttgtaacgagtgttacgcatat
ttcataggatttgagggtggaatggatcctccagctttccagcgtgctgagcggcaaaga
aaggaaaatccatctgctatggacaagactgtagacccaaatgcgtttgaggagttgaac
agccaacatgtgggcagagatgaaagactgcagtctactgagccacaaagccttggggga
actgctcaggacatgcctgctaatgatggtggttatggtaaatttaatggagaggacgat
acatgttctaaagctcatgatgaatcagacaacttttctgatattgatgatgctgaggtt
gatggctaccttcacaatgaggaggaggctaagtacaaaaaaatcatttgggaagaaatg
aatcgtgagtatcttgaggaacaggcagctaaggaggcagctgcagcagctgctaaggaa
gcttgggaggcaacttttaagaactgtccagaggacgtgcaagctgcaaagaagcttgaa
gcagccgttgcagcagctgtagcaaaatcgaaaaaggaaaggcaacaaaaacgagctgca
gaagcaaggaactcagctcctccacaatctgcttcagaagctgcccgccaaatgctgaca
aagaagagaatcagttcaaaaatcaattatgatgccttggagaaactctttgatgaacct
ggctctaaggatcccaagaaaccaaggacagaatcacattctgatgatgatgacaagttc
ccgcatacagataacgaaaaggatgacctggggcaagaaaataaaaatgtggacgaggag
gatgccgaagcatataactacacaaatgatccttattatgaaaatggcgaagaagcatat
ggctatgattacaacgagaacgatgattatagtgtttattag
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