Manihot esculenta (cassava): 110621045
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Entry
110621045 CDS
T05761
Name
(RefSeq) transcription initiation factor IIB-2
KO
K03124
transcription initiation factor TFIIB
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110621045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mesc03021
]
110621045
Transcription machinery [BR:
mesc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
110621045
Prokaryotic type
Archaeal type
TFB
110621045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
DUF7573
WHD_GDS1
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
110621045
NCBI-ProteinID:
XP_021620763
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All DBs
Position
8:complement(5670529..5675544)
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AA seq
313 aa
AA seq
DB search
MGDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
GPTNPLLTDGGLSTVIAKPNGASGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG
LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK
KEIGRAKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQEAVQKSEEF
DIRRSPISIAAAVIYIITQLAEEKKPSLKDISGATGVAEGTIRNSYKDLYPHVLKIIPSW
FAKEEDLKNLCSP
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgggggacgcgttttgctcggactgcaagcggcagacggaggtggtgttcgaccactcg
gcgggggataccgtctgttcggagtgtggattggtgctcgaatcgcattcgatcgatgag
acctccgagtggagaaccttcgctaatgagtccggcgacaatgatcccgtccgtgttggt
ggccccactaaccctctcttgaccgacggtggtctttccactgtcatagctaagcctaac
ggtgcttctggcgagttcctttcctcttccttgggtcgctggcagaatagaggctccaat
ccggatcgggggttgattttggcgtttaaaactatagctactatgtccgataggttgggg
cttgttgcaactataaaggaccgggccaatgagatatataaacgggtggaagatcagaag
tccagcagaggaagaaatcaggatgccttattggctgcatgcctctacattgcttgtcgc
caagaagacaagccacgaactgtaaaggaaatttgctccgttgccaatggagccacaaag
aaggaaattggccgagcaaaagaatacatagtgaaacaactggggttggagacaggtcag
tcggtggagatgggaactattcatgctggggactttatgaggcgtttttgttcaaatctt
ggcatgaataaccaagcggtgaaagctgcacaagaagctgtgcagaagtcggaagagttt
gacataaggaggagtcctatatcaattgcggcagcagtaatttatatcatcactcaactt
gcagaagagaagaagccgagtctcaaagatatttcaggggccacgggagttgctgaagga
actatcagaaattcatacaaggacctctatcctcacgtgttgaagataattccaagctgg
tttgccaaagaagaggatcttaagaatctctgcagtccttga
DBGET
integrated database retrieval system
