Manihot esculenta (cassava): 110621088
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Entry
110621088 CDS
T05761
Name
(RefSeq) syntaxin-related protein KNOLLE
KO
K08486
syntaxin 1B/2/3
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
110621088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mesc04131
]
110621088
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mesc04147
]
110621088
Membrane trafficking [BR:
mesc04131
]
SNARE
Syntaxin (Qa)
Stx-PM
110621088
Exosome [BR:
mesc04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
110621088
Exosomal proteins of other body fluids (saliva and urine)
110621088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Synaptobrevin
T2SSF
Piezo_THU9_anchor
Band_3_cyto
Prominin
Syntaxin_2
DUF2513
Motif
Other DBs
NCBI-GeneID:
110621088
NCBI-ProteinID:
XP_021620837
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All DBs
Position
8:complement(38323040..38324417)
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AA seq
313 aa
AA seq
DB search
MNDLMTKSFTSYVDLKKEAMKDLEAGPDADLEMQNATNTMDRNLSLFLEEAETAKKEMES
IREILVRLQESNEESKSLHKPESLKSLRNKINTDIVTVLKKARAIKSQLEEMDRANAANK
RLSGYKEGTPIYRTRLAVTNGLRKKLKDLMMDFQGLRQKMMTEHKETVERRYFTVTGEYP
DEEIIDKIISDENGGEEFLKRAVQEHGKGRVLETVVEIQDRHDAAKEIEKSLLELHQVFL
DMAVMVEAQGEQLDDIEHHVLNASHYVKDGAKELKSAKDYQRSSRKWMCIGIILLLLIIL
VIVIPVATSFSHS
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatctgatgaccaaatccttcaccagctatgtggacctgaagaaagaggccatg
aaagacctggaagctggtcctgacgctgatctagagatgcaaaacgcaacaaacaccatg
gatcgtaacctcagcctattccttgaagaagctgagactgctaagaaagaaatggaatca
atccgcgagattctagttcgtctccaagaatccaatgaagaaagtaaatccctacacaaa
ccagagtccttaaaatcattgcgcaacaagataaacacagacattgtcactgtcctcaaa
aaggcaagagccatcaaatcccagctagaagaaatggaccgcgccaacgcagcaaacaaa
cgcctctctgggtataaagaaggaaccccaatttacagaactagacttgccgtcaccaat
ggtctgcgaaagaagttgaaggatctcatgatggatttccaggggttaaggcagaaaatg
atgactgagcacaaagaaactgtagagaggagatatttcacagtgactggagagtaccca
gatgaagagatcattgacaagataatctctgatgaaaatggaggtgaagagttcttaaaa
cgagcagtacaagagcatggaaaagggagagtattagagacagtggtggagatacaagac
aggcatgatgcagcaaaagagatagagaagagcttgttggagctgcaccaggtgtttttg
gacatggcagtaatggtggaggcacaaggtgagcagttggatgatattgagcaccatgtg
ttgaatgctagccactatgtgaaggatggagccaaagagctcaagagtgctaaagattac
cagaggagcagcaggaagtggatgtgcattgggattatacttttgttgttaataattctt
gtgattgtgattcctgttgctactagcttcagccattcttga
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