KEGG   Manihot esculenta (cassava): 110621096
Entry
110621096         CDS       T05761                                 
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
mesc  Manihot esculenta (cassava)
Pathway
mesc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110621096
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mesc03041]
    110621096
   03400 DNA repair and recombination proteins [BR:mesc03400]
    110621096
Spliceosome [BR:mesc03041]
 Complex B
  Other components
   Prp19 complex
    110621096
 Complex C
   Prp19-CDC5 complex
    110621096
DNA repair and recombination proteins [BR:mesc03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    110621096
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect
Other DBs
NCBI-GeneID: 110621096
NCBI-ProteinID: XP_021620845
LinkDB
Position
8:37497250..37503767
AA seq 1017 aa
MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKT
EWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACVKDENYEPGDDPR
KLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEARR
LASLQKRRELKAAGIDTRQRKRKRKGIDYNAEIPFEKRPPPGFFDVTDEDRPVEQPKFPT
TIEELEGKRRVDVEAQLRKQDIAKNKIAQRQDAPSAILQANKLNDPETVRKRSKLMLPAP
QISDHELEEIAKMGYASDLAGNEELTEGNGATRALLANYAQTPQQGMTPLRTPQRTPAGK
GDAIMMEAENLARLRESQTPLLGGENPELHPSDFSGVTPKKREIQTPNPMLTPSATPGGV
GLTPRIGMTPSRDGYSFGMTPKGTPIRDELHINEDMDLHDSAKLEQRRQADIRRNLRSGL
STLPQPKNEYQIVIQPPPEDHEEPEEKIEEDMSDRIARERAEEEARQEALLRKRSKVLQR
ELPRPPAASLELIRNSLLRADEDKSSFVPPTSIELADEMIRKELLLLLEHDNAKYPLDEK
QNKEKKKGAKQAANRSAMFVPVIEDFEEDELKEADKLIEEEVQYICVAMGHESESVDVFV
DAHRTCLSDLMYFPTRNAYGLSSVAGNVEKLAALQNEFENVKARLEAEREKALRLEKKVN
VLTQGYQTRSERQLLPPIESILKQMDTAGTELECFQALQKQEQLAATHRINGLWEEVQKQ
KELEQTLQRRFGNLVAELERIQHLIADYRTLAKQQEEIAARNCALELAESAAKQAAMQNS
ETSEPMPSDDVGSSAPVDSSKLEISEQQINAAQEHMHASLKQEGTNADSQNKHAPMDTDA
SLSTDVPSVVEELHAARVPKADENNKDGVPANYLINQGDDISDVVVVEGNKLKEESVNVN
ASDIKISTDVIRDDAVAEDQQILMEITKPDGVVTKGGLGEDERSKSTYDEVNAVSSE
NT seq 3054 nt   +upstreamnt  +downstreamnt
atgaggattatgataaaaggtggtgtgtggaagaacactgaggatgagatcctcaaagca
gcggttatgaaatatgggaagaatcaatgggctcgaatctcttcgcttctcgttcgtaaa
tctgctaaacagtgtaaagctcgctggtatgagtggcttgacccgtcaatcaaaaagact
gagtggaccagagaagaagatgagaagttgcttcatcttgctaagctcatgccaactcag
tggagaacaattgccccaattgttggccgtacaccatctcaatgccttgaacgctatgag
aaacttcttgatgcagcctgtgttaaggatgagaactatgaacctggtgatgacccacgg
aaattgcgtcctggagagattgatccaaatccagagtcaaagcctgcacgtcctgatcct
gttgatatggatgaagatgaaaaggaaatgctttctgaagcacgagctcggttagccaac
actagaggcaagaaagcaaaaaggaaagctagagagaaacagcttgaagaggctaggagg
cttgcatccttgcagaaaaggagagaactaaaagctgctggtattgatacacggcaacgg
aagaggaaaaggaaggggatcgattataatgcagaaattccttttgaaaagaggcctcct
cctggcttttttgatgttactgatgaagatagacccgtggaacagcctaagttcccaact
accattgaagaacttgaggggaaaagaagagttgatgtagaggcccagttgagaaagcag
gatattgcaaagaataaaattgctcaaaggcaggatgctccatcagctatattacaagcg
aacaagttgaatgatccagaaacagtgaggaaaagatcaaagctgatgcttccagcacca
cagatttcagaccatgaattagaggaaattgcaaagatgggatacgcaagtgatcttgct
gggaatgaggaactaacagaagggaatggtgcaacacgtgctcttttggcaaactatgcc
caaacaccacagcagggaatgacaccattgcgaactccacaaagaactcctgctggtaag
ggtgatgctattatgatggaagcagaaaacttggcacggttgcgggagtcacagactcca
ttattgggaggagagaatccagagttgcacccttcagatttttcaggggtcacacccaag
aaaagagagatccaaacaccaaatccaatgttgaccccctctgcaactcctggaggcgtt
ggtcttactcctagaattggcatgacgccttcaagggatgggtactctttcggtatgaca
ccaaaaggaactcctatcagggatgaactccatataaatgaagacatggatttgcacgat
agtgcaaaacttgagcaacgaagacaagctgatataagaaggaacctgcggtctggtctt
agtactcttccacagcccaagaatgaatatcaaatagttattcagccacctccagaagac
catgaagaaccagaagagaaaattgaagaggatatgtctgataggattgctagagaaagg
gctgaggaagaagcaagacaggaggctttgcttaggaagagatcgaaagtactgcagaga
gaactccctaggcctcctgctgcttcgctggaactgattagaaattctttgctgagagct
gatgaagataagagttcctttgttccgcctacatcaattgaactggctgatgaaatgata
cggaaggagctgcttctcttacttgagcatgataatgcaaaatatccactagatgagaag
cagaataaggagaaaaagaaaggtgccaagcaagctgcaaatcggtctgctatgtttgtc
cctgtgatagaggattttgaagaagatgagctgaaagaagctgataagttgattgaggaa
gaggttcagtatatatgtgtagcaatgggacatgaaagtgaatctgttgatgtgtttgtt
gatgcacacagaacatgtctaagtgatctgatgtacttccccactcgaaatgcttatggt
ctctcaagtgttgctggaaatgtggagaaactggcagccttacagaatgaatttgagaat
gtgaaagcgaggctagaggctgaaagggagaaagcattacgccttgagaagaaggttaat
gtccttacacagggttatcagacacggtcagagaggcagctattgccgccaattgagtca
attttaaagcagatggacactgctggaacagaacttgagtgcttccaagctttacagaag
caagagcaattggcagcaacacacaggatcaatggcctctgggaggaagttcagaagcaa
aaggagctagaacaaactttgcaaaggcggtttggaaatcttgtggctgagctggaaagg
atacaacatcttattgctgattacagaacactagcaaagcaacaggaagaaattgctgcg
aggaattgtgcacttgagttggctgagagtgctgcaaagcaagctgctatgcagaactca
gagacttctgagcctatgccttcagatgacgttggaagttctgcaccagttgattcatct
aaacttgaaatctctgagcagcaaataaatgctgctcaagaacatatgcatgccagtctg
aaacaggagggtacaaatgctgattcacagaacaagcatgcacccatggacacagatgca
agcttatctactgatgtaccttctgttgtggaggagctgcatgctgctcgtgtcccaaag
gctgatgaaaataacaaagatggagttcctgcaaactacttgattaaccaaggagatgat
atttctgatgtggtggttgtagagggaaataagttgaaagaggaatctgttaatgtaaat
gctagtgacataaaaattagcactgatgttatacgggatgatgcagttgctgaagaccaa
caaattctcatggaaataacaaaaccagatggtgttgtaaccaaaggaggccttggtgaa
gatgagaggtcaaaatcaacttatgatgaagtgaatgctgtcagttctgaatag

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