KEGG   Manihot esculenta (cassava): 110621119
Entry
110621119         CDS       T05761                                 
Name
(RefSeq) splicing factor U2af small subunit B
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
mesc  Manihot esculenta (cassava)
Pathway
mesc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110621119
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mesc03041]
    110621119
Spliceosome [BR:mesc03041]
 Complex A
  U2 snRNP components
   U2 related factors
    110621119
 Complex B
    110621119
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus PqqF-like_C_4 zf-CCCH_4
Other DBs
NCBI-GeneID: 110621119
NCBI-ProteinID: XP_021620889
LinkDB
Position
8:2017192..2020275
AA seq 313 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMQTP
GVDSQAQSQSLDPRKIQDHFEDFYEDLFEELSKYGDIESLNICDNIADHMVGNVYVQFRE
EEHAANALNNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISR
ELRRRLFGRSRRRRSRSRSHSPNKLRGYDERLHGNRSSGRRDDDRDHYHERGRRHRSRSP
GRRGGRSRSPAGRRNRSPPARESSVERRAKIEQWNREREQAEFGNKDSQNPDNDRSSNGD
AKIGGRYDDPQHQ
NT seq 942 nt   +upstreamnt  +downstreamnt
atggcggagcacttagcttccatattcggaacggagaaggatagagtcaactgtcctttc
tacttcaagatcggagcctgcaggcacggcgatcgttgctccaggctccacaccaagccc
agcatcagccctacccttctcctttccaacatgtaccagcgccccgacatgcaaactccc
ggtgtagattctcaggcgcaatctcagtcccttgacccccgcaaaatccaagaccacttt
gaagatttctatgaggacctatttgaggaactcagcaaatatggagacatcgagagctta
aatatctgtgataatatcgctgaccacatggtgggtaacgtttatgttcagttcagagaa
gaagaacatgcggccaatgcgcttaacaatctaaatggaaggttttatgcagggcgccca
atcattgttgatttctctcctgttacggattttcgtgaagctacatgtaggcagtacgag
gaaaatgtatgcaatcgaggtggctactgcaacttcatgcatctgaagaagattagcagg
gagttaaggaggcgcttatttgggaggagtaggcgaagacgtagccgcagtagaagccat
agtcctaacaagctccgtggttatgatgaacgcttgcatggtaatcgcagttcgggtaga
cgagatgatgatagggatcattaccatgagaggggcaggaggcatagaagccgaagtcct
ggacgcagaggaggacgaagcagaagccctgcaggaaggaggaatagaagtcctcctgct
agagagagcagtgttgaaagaagggctaagattgagcagtggaacagggagagagaacag
gcagaatttggtaataaagacagccaaaaccctgacaatgacaggagcagcaatggtgat
gctaagattggaggtcgctatgatgatcctcagcaccagtag

DBGET integrated database retrieval system