Manihot esculenta (cassava): 110621135
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Entry
110621135 CDS
T05761
Name
(RefSeq) 26S proteasome regulatory subunit 6B homolog
KO
K03063
26S proteasome regulatory subunit T3
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
110621135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
mesc03051
]
110621135
Proteasome [BR:
mesc03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
110621135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_16
AAA_5
AAA_lid_3
AAA_2
AAA_22
DUF815
RuvB_N
nSTAND3
NPHP3_N
AAA_28
TIP49
RNA_helicase
AAA_14
Sigma54_activat
Mg_chelatase
IstB_IS21
TsaE
AAA_24
AAA_7
AAA_18
DUF3450
Parvo_NS1
AAA_30
NTPase_1
NACHT
ATPase_2
DUF5906
AAA_3
NB-ARC
AAA_33
AAA_11
ABC_tran
AAA_25
ATPase
AAA_19
DUF6570
AAA_17
Motif
Other DBs
NCBI-GeneID:
110621135
NCBI-ProteinID:
XP_021620925
LinkDB
All DBs
Position
8:complement(39721319..39726734)
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AA seq
420 aa
AA seq
DB search
MASSAMVLDPKSAPELPPSIPAVGSDLQKAFADLSNGDEDDLYSRLKSLQRQLEFIDIQE
EYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILST
INRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIR
EAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQK
YLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDG
FDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTSKMNLSDEV
DLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcatcggcaatggtcctcgaccccaaatctgcaccagagcttcctccgtcgatc
ccagcagtgggatccgacctccagaaagcctttgcggacctttccaatggcgatgaagac
gacctctacagccgacttaaatcccttcagcgtcagctcgagtttattgatattcaagaa
gagtatgttaaagacgagcagaagaatttgaaacgtgagctccttcgtgcccaggaagag
gtcaagcggatccaatcggttccgctcgtcatcggtcagttcatggaaatggtcgaccag
aacaatggtatcgtgggctccaccactggctctaattactatgtgagaattcttagcacc
attaatagggagcttctgaagccctctgcttcagtcgctcttcaccggcattccaatgcc
cttgtggatgtgttgcctcctgaggctgattccagtatttctctgctcagccagtccgag
aaacctgatgtcacatacaatgacattggaggatgcgacattcaaaagcaggaaattcgt
gaagcagtggagttgccactgactcaccatgaactgtacaaacaaattggaatagatccc
cctcgtggtgtcttgctttatggccctcctggtactgggaaaaccatgcttgctaaggct
gttgctaatcatacaactgcggcttttattagagttgttggctccgagtttgttcaaaag
tatttgggagaggggccccgtatggttcgtgatgtttttcgccttgctaaggagaatgcc
ccagcaattattttcattgatgaggttgatgctatagctactgctaggtttgatgctcaa
actggggctgacagagaagttcaacgaatcttgatggaacttctgaatcagatggatggg
ttcgaccagacagtgaatgttaaggtaataatggcaacaaatcgtgcagacactttggac
cctgcactacttcgtcctggaagacttgaccgaaaaattgaatttccattgcctgataga
cggcaaaagaggcttgttttccaggtttgcacctctaaaatgaatctcagtgatgaggta
gacttggaggattatgtttctcggccagacaaaatcagtgccgcagagattgcagcaatt
tgccaggaagcaggcatgcatgcggttcggaagaacaggtatgtcatactccccaaggac
tttgagaaaggttacagaaccaatgtgaagaagcccgataccgactttgaattctacaaa
tga
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