Manihot esculenta (cassava): 110621138
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Entry
110621138 CDS
T05761
Name
(RefSeq) probable nucleolar protein 5-2 isoform X1
KO
K14565
nucleolar protein 58
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110621138
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mesc03009
]
110621138
Ribosome biogenesis [BR:
mesc03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
110621138
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nop
NOP5NT
DUF6041
Motif
Other DBs
NCBI-GeneID:
110621138
NCBI-ProteinID:
XP_021620929
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Position
8:complement(36613436..36617321)
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AA seq
579 aa
AA seq
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MLVLFETPAGFALFKVLDEGKLAKVQDVWKEFSTADSARKVVKLKAFSKFENTSEALEAA
TKIIEGTASKGLRKFLQAHCEGETLAVADSKLGNAIKEKLKIECVHSSAVMELMRGVRSQ
LTELIAGLGTQDLAPMSLGLSHSLSRYKLKFSPDKVDTMVIQAIGLLDDLDKELNTYAMR
VREWYGWHFPELAKIVQDNILYAKVVKLMGSRDNAAKFDFSEILPEEVETELKDASLISM
GTEVSEVDLMNIRELCDQVLSLAEYRTQLYDYLKSRMNTIAPNLTALVGELVGARLIAHG
GSLLNLAKQPGSTVQILGAEKALFRALKTKHSTPKYGLIFHASLVGQAAPKLKGKISRSL
AAKAALAIRYDALGDGQDNSLGLENRAKLEARLRNLEGRELTRSAGSAKGKPKIEAYDKD
RKKGAGGLITPAKAYNPSADALLGRTPDSTSGNGEEIVPKKRKSETEPSHTGGVAEEAPV
TGEQKKEKKKKKKADEGETAVQNDGTSTAEQEGEGKAKKEKKKKKHQAETESNDVQNESE
NVDAGEKKKKKRKHAEQDEEPDMPIKRKEKKKRKNDQGK
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtgttgtttgagacgccagcgggctttgccctcttcaaagttttggatgaaggg
aagctagctaaagttcaggacgtatggaaagagttctccactgcagactcagcaagaaag
gttgtcaagttgaaagctttttccaagtttgagaatacatcagaggctctagaagctgca
acaaagataattgaaggcacagctagcaaaggtctccgcaagtttttgcaggctcactgt
gagggtgaaactttagctgtggctgactcaaagcttggaaatgctatcaaggaaaaactg
aaaatagaatgtgttcacagcagcgctgtcatggaattgatgaggggtgttaggagtcag
ttgactgaactcatagccggtctaggcactcaagatttggcaccaatgagcttgggttta
tctcatagtctgtctaggtacaaactgaagttcagtcccgataaggttgatacaatggtc
attcaagctattggtttgcttgatgatcttgataaggagcttaacacatatgcaatgaga
gttagagaatggtatggttggcattttcctgaacttgctaagattgtacaagacaacatc
ctatatgccaaagtggtgaaactgatgggcagtcgtgacaatgctgcaaagtttgatttc
tctgagatactaccagaagaagttgagacagagctgaaggatgcatctttaatatccatg
ggaactgaagtcagtgaagtcgatttgatgaatattagagaactctgtgatcaggtttta
tctctagctgaatatagaactcagctgtatgattatttaaaaagcaggatgaacaccatt
gcaccaaatttgactgcccttgttggggaacttgttggagctcgtctcattgctcatggg
ggtagcttattgaatctcgcaaagcagcctgggagtacagttcaaattcttggggcagaa
aaggctcttttcagagctttaaagacaaagcattcaactcccaaatacgggttaattttc
catgcatccttggttggtcaggcagctcccaagttgaaggggaaaatttccagatcgtta
gctgcaaaagcagcactggcaattcgatatgatgctcttggagatggccaagataactct
cttggactggaaaaccgtgccaagcttgaagcacggttaaggaatcttgaagggcgagaa
ttgactcgttctgctggatctgctaaaggcaaacctaaaatagaagcctatgacaaggat
agaaagaagggagctggaggattgatcactcctgccaaggcttataatccttctgcggat
gctcttcttgggcgaacaccagactccacttctgggaatggggaagaaatcgtcccaaag
aagaggaagagtgagacagaaccatctcatactggaggagtggcagaagaagctcctgtt
actggtgagcaaaagaaagagaagaagaaaaagaaaaaagcagatgaaggggaaacagct
gtgcaaaatgatggaactagcactgctgagcaggaaggtgaaggaaaagcaaagaaagaa
aagaagaaaaagaagcatcaagctgaaactgaaagcaacgatgtgcaaaatgagagtgaa
aatgttgatgcaggagaaaaaaagaaaaagaagcgaaagcatgctgaacaagatgaagaa
cctgacatgccaatcaagagaaaagagaaaaagaagagaaaaaatgaccaaggaaagtag
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