Manihot esculenta (cassava): 110621218
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Entry
110621218 CDS
T05761
Name
(RefSeq) LOW QUALITY PROTEIN: myosin-12-like
KO
K10357
myosin V
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
110621218
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesc03019
]
110621218
04131 Membrane trafficking [BR:
mesc04131
]
110621218
03029 Mitochondrial biogenesis [BR:
mesc03029
]
110621218
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mesc04812
]
110621218
Messenger RNA biogenesis [BR:
mesc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
110621218
mRNA cycle factors
P-body specific factors
110621218
Membrane trafficking [BR:
mesc04131
]
Others
Actin-binding proteins
Myosins
110621218
Mitochondrial biogenesis [BR:
mesc03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
110621218
Cytoskeleton proteins [BR:
mesc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
110621218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
Hpr_kinase_C
TSC22
AAA_22
AAA_6
nSTAND3
AAA_16
Motif
Other DBs
NCBI-GeneID:
110621218
NCBI-ProteinID:
XP_043814821
LinkDB
All DBs
Position
8:41468029..41488943
Genome browser
AA seq
1557 aa
AA seq
DB search
MGTPVNIIVGSHVWVEDPEDAWIDGEVIAIKGRDATIVATNGKTIAAEIFSIYPKDTEAP
PAGVDDMTKLAYLHEPGVLHNLACRFSLNEIYTYTGNILIAVNPFQRLPHLYDIHMMEQY
KGAAFGELSPHLFAVADTCYRAMMNEQESQSILVSGESGAGKTETTKMLMRYLAFMGGRS
GTEGRTVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKQGKISGAAVRTYLLE
RSRVCQVSDPERNYHCFYMLCAAPPEDVKKFKLGDPREFHYLNQSNCYQVANVDDAREYL
ETRNAMDIVGISQDEQDAIFRVVAAILHLGNIDFIKGKETDSSKLKDDKARYHLLTAAEL
LRCNENALEDSLCKRVIVTPDGNITKPLDPDLAVLSRDALAKTVYSRLFDWIVDKINNSI
GQDPNATSIIGVLDIYGFESFKINSFEQLCINLTNEKLQQHFNQHVFKMEQEEYTREEIN
WSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTYKGHRRFSKPKL
ARTDFTINHYAGDVTYQADQFLDKNKDYIVAEHQALLNASKCPFVANLFPPLPEETSKQS
KFSSIGTRIKQQLQALMETLNTTEPHYIRCVKPNTLLRPGIFENFNVLNQLRCGGVLEAI
RISCAGYPTKRTFDEFLDRFGMLTPDVLEGSDEKSACIAILERMGLKGYQMGKTKVFLRA
GQMAELDAQRSEVLASSARRIQRQIRTYLTRKVFIAMRRASIHMQKLWRAQLARKLYEHM
REEAASIRIQKNVRAHTARRLYINLQTSAMFIQTGLRAMAARNEYRYRRRTKAAIIIQTQ
WRRFQALSAYKQQKKATLTLQCLWRARVARKELRKLRMAARETGALKEAKDKLEKRVEEL
TWRLEFERHLRIDLEEAKGQEIAKLQNALQEKQGEVDEAYAAIIREKEAAKLAIEQAPPV
IKEVPVVDNIKIESLRNQNEELEDKLREMKMKMEEFEDKCSKLKNESNARLRDAEEAQLK
TMKLQETIERLELNLSNLESENQVLRQQALVASANNGLSEELDILKHKIKDLESENELLC
KRPAVLVQKATPERVSSQVNNVVNGHKIEEGPQMTKEPEPLVSLLTKQRSLTDRQQENHD
VLIKCLVEDKQFDKSRPVAACVVYKSLLQWRSFEAEKTNIFDRIIQTIKSCVESEDNTSN
LTYWLSTTSTLLFLLQSTLKASNMQNASSQRNRTSPTTLFGRMVQGFQPPSMGIGVSSGY
SGMVGKSSEQLKVEAKYPALLFKQHLTACVEKIYGLIRDSVKKEISLLLNLCIQAPRSMR
ARSIRGSSKNIHSNIVARQQASNIHWQSIVNKLDNTLSIMSENNVSPVFTRKIFSQVFSF
INVQLFNSLLLRREFCSFSNGEYLKAGLQELEQWCQKVSNQFAGSSLDELQHIRQAVGFL
VLHQKAQKSADEITNELCPMLSIPQIYRIGTMFWDDKYGTQGLSPDVIGKMRTLMAEDSI
NMPNNYSFLLDVDSSIPFSMEEIFRSFDGISLSDVDPPQLLRQRDDFNFLLQTMDTL
NT seq
4674 nt
NT seq
+upstream
nt +downstream
nt
atgggaactccagtcaatatcatagttggatcacatgtttgggtagaggatcctgaggat
gcatggattgatggtgaagtaatagcaatcaaaggcagagatgccaccatagttgccaca
aacgggaaaactatagctgctgaaattttcagcatatatccgaaagacacagaggcacca
ccagcaggagttgatgacatgaccaaattggcttacctccatgaaccaggggtcttacat
aaccttgcttgtcggttttctctcaatgagatatatacttacactgggaacattctaatt
gccgttaatcctttccaaagactgccgcatttgtacgacattcacatgatggagcagtac
aaaggagcagcttttggggagctgagtccacacctttttgctgtggcagacacttgttac
agagcaatgatgaacgaacaggaaagccagtccattttggtaagtggggagagtggagct
ggtaaaacagagacaacaaagatgcttatgagataccttgcattcatggggggcagatca
ggcacagaaggaagaactgtagaacaacaagttttggagtcaaatccagtcctggaagca
tttgggaatgctaaaactgtgaaaaataacaattccagtcgttttggaaagtttgttgag
atacagtttgataagcaagggaagatatctggagctgcagttcgcacttatcttcttgaa
aggtcacgtgtttgccaagtttctgaccctgagagaaattaccattgtttttacatgctt
tgtgcagcacccccagaggatgtaaaaaaattcaagttaggggatccaagagaattccac
tatttgaaccaatccaattgttatcaagtagcaaatgtagatgatgccagagagtatttg
gagaccagaaatgcaatggatattgtagggatcagccaggatgaacaggatgcgatattc
cgtgtagttgctgcgatcctccatcttggaaatattgacttcatcaaaggaaaagaaaca
gattcttccaaactcaaagatgataaagcacgctaccatcttctaactgcagcagagcta
ctaaggtgcaatgagaatgcactggaagactcactttgcaagcgtgtcatagtgactcct
gacggaaacattacaaaacctctggacccagatttagctgtcttgagtcgtgatgcctta
gctaagactgtgtactctaggctgtttgattggattgtggataagatcaataattcaata
ggtcaagatcccaatgcaacaagtataattggggtccttgatatttatggctttgaaagc
ttcaagattaacagttttgagcagctatgcatcaacctaacaaatgagaagttgcaacaa
cattttaaccagcacgtatttaagatggagcaagaagagtatacaagagaggaaataaat
tggagctacgttgaatttgtagataaccaggatgttttggatcttattgagaagaaacct
gggggtataatagcccttcttgatgaggcctgcatgtttccaaagtcaactcatgagaca
tttgcacagaagatgtaccagacatacaaaggacacagacgcttcagcaagccaaaactt
gctcgaactgacttcacaatcaatcactatgcaggagatgttacataccaagctgatcaa
tttcttgataaaaataaagattatatcgtagcagagcatcaagccttgttaaatgcatct
aagtgcccttttgttgctaatcttttccctccattaccggaagagacatccaagcaatcc
aaattctcttccatcggtacccgaatcaagcaacaattacaagctttaatggagacattg
aacacaacagagccacattatatcagatgtgtaaagccaaatacacttttgaggcctgga
atctttgagaacttcaacgtattaaaccaattaagatgtgggggagtgctagaggctatt
aggataagttgtgctgggtatccgacaaaaagaacgtttgatgagttccttgatcgtttt
ggaatgcttactcctgatgttctagaagggtctgatgaaaaatcagcatgcattgccatc
ttggaaagaatgggtttaaagggttaccagatggggaaaacaaaggtgttcctcagagct
ggacagatggccgagttagatgcacaaagaagtgaggtgttggctagttctgccagacga
atccagagacaaattcggacatatctaaccagaaaagtgtttattgctatgcggagggcc
tcaatccacatgcaaaaactctggagagcacaacttgcccgtaagctatatgaacacatg
agagaagaagcagcctctatccgtatacaaaaaaatgttcgtgctcatacagcaagaaga
ctttacataaatttacagacatcagcaatgtttattcaaactggattacgtgcaatggca
gctcgaaatgaatatagatacagaagaagaacaaaggctgcaattattattcagacacaa
tggagaaggttccaagctctttctgcttataaacagcaaaagaaagcaactctcacactt
caatgtctctggagagcaagggtagcaagaaaggagctcagaaagctaaggatggctgca
agagaaacaggggcacttaaagaagctaaggacaaactagagaagcgcgttgaagagtta
acatggcgactggaatttgaaaggcatttgaggattgatctcgaagaagctaaagggcaa
gaaattgcaaagttacaaaatgcacttcaagaaaagcaaggagaggtggatgaagcctat
gctgcaattatccgggagaaagaagcagcgaagttggctatagaacaagccccaccagtc
atcaaagaagttccagttgtggacaacatcaaaatagagtcactaaggaatcaaaatgag
gaactggaggataagctaagagagatgaagatgaaaatggaggagtttgaggacaagtgt
agtaaactaaaaaatgagagcaacgcaagactaagagacgcagaagaagcacagctgaaa
acgatgaaactccaagagaccatcgaaagattagaattgaatttgtccaatcttgaatct
gagaatcaggtactacggcagcaagctctggttgcatcagcaaataatggtctctctgaa
gaactagatatcctcaagcataagataaaagatctggagtcagagaatgaactactctgc
aaacgaccagctgttctggtgcagaaagcaacacctgaaagggtttcatctcaagtcaat
aatgttgtcaacgggcacaaaatagaggaagggcctcaaatgacaaaagagccagaacct
cttgtctcccttttaactaaacaaagatccctaacagataggcaacaggaaaaccatgat
gtactcatcaaatgtcttgtggaagacaaacagtttgataagagcagacctgttgctgcc
tgtgttgtatacaaatcacttcttcaatggagatcctttgaagcagagaagacaaatata
tttgatagaatcattcagacaatcaaatcctgtgtagagagtgaagataacaccagtaac
ctaacatattggctctcaacaacttctactcttttgtttcttctccaaagtacacttaag
gcaagcaacatgcagaatgcatcatcacagcggaatcgaacctccccaacaaccttattt
ggaagaatggtacaaggattccaaccaccttcaatgggtataggagtgtcaagtgggtac
agtggaatggtgggaaaatccagtgagcagttaaaagtggaagccaagtatccagcactg
ctatttaagcaacatctaactgcatgtgttgagaaaatatatgggctgatccgtgatagt
gtcaagaaggagataagtttgttattgaatttgtgcatccaggcaccgagatcaatgaga
gctagatcaataagagggtcatctaaaaacattcattcaaatattgttgcaagacagcaa
gcatcaaacatacattggcaaagcattgttaataagctagacaataccttgagtataatg
tcagagaataatgtctctcctgtgttcacaaggaaaattttcagtcaggttttctcattc
ataaacgtacagctctttaacagcttattgcttcggcgtgagttctgctcgtttagcaat
ggagaatatctgaaggcaggtttgcaggaattggaacagtggtgccagaaagtatcaaat
cagtttgcaggatcatcattggatgaactccaacacataaggcaagctgtggggtttctg
gtgttgcatcaaaaagctcaaaaatctgctgacgagatcacaaatgaattatgcccgatg
ttgagcattccgcaaatatatcgcattgggacaatgttctgggatgataaatacggaaca
cagggattatctccagatgtgattggcaagatgagaacgctaatggcagaagattctata
aacatgcccaataactattctttcttgctcgatgttgattcaagcatacctttttcaatg
gaagagatattccgatcattcgatggaataagcctatctgatgtggacccgccacagcta
cttcgtcaaagagatgacttcaattttctattgcaaactatggatactctttaa
DBGET
integrated database retrieval system
