Manihot esculenta (cassava): 110621250
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Entry
110621250 CDS
T05761
Name
(RefSeq) glycine--tRNA ligase, mitochondrial 1
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
110621250
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mesc01007
]
110621250
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mesc03016
]
110621250
03029 Mitochondrial biogenesis [BR:
mesc03029
]
110621250
Enzymes [BR:
mesc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
110621250
Amino acid related enzymes [BR:
mesc01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
110621250
Transfer RNA biogenesis [BR:
mesc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
110621250
Mitochondrial biogenesis [BR:
mesc03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
110621250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
tRNA-synt_2b
WHEP-TRS
Motif
Other DBs
NCBI-GeneID:
110621250
NCBI-ProteinID:
XP_021621137
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Position
8:complement(33618354..33622618)
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AA seq
735 aa
AA seq
DB search
MRILLRLISSSSTGHHFRAGLSSRHQLSAQLSTLIHPLKSHSPPMAATEDSLRKALAEKQ
SAVEGQGNAVRALKAAKVSKAEIDAAIGTLNALKLEKSSIEKQLQAVVSGNGPDSSVSKE
AFRQAVVNTLERRLFYIPSFKIYRGVAGLYDYGPPGCAVKSNVLAFWRQHFVLEENMLEV
DCPCVTPEVVLKASGHVDKFTDLMVKDEKTGTCYRADHLLKDFCNEKLQKDLSITAEKAA
ELKHVLAVLDDLSAEELGAKIKEYGIVAPDTKNPLSDPYPFNLMFQTSIGPSGLIPGYMR
PETAQGIFVNFKDLYYYNGNKLPFAAAQIGQAFRNEISPRQGLLRVREFTLAEIEHFVDP
EDKSHPKYPEVADLEFLMFPREEQMSGQSAKRIRLGEAVSKGIVNNETLGYFIGRVYLFL
TRLGIDKKRLRFRQHLANEMAHYAADCWDAEIECSYGWIECVGIADRSAYDLRAHSEKSG
VPLVAHEKFSEPREVEKLVIAPVKKELGLAFKGNQKMVVEALEAMNEKEAMEMKASLETK
GEVEFYVCTLEKNVCIKKNMVTISKEKKKEHQRVFTPSVIEPSFGIGRIIYCLFEHSFYT
RPSKAGDEQLNVFQFPPLVAPIKCTVFPLVQNQQYEEVAKVISRSLTAAGISHKIDITGT
SIGKRYARTDELGVPFAITVDSTSSVTIRERDSKDQIRVNVEEAASVVKSVTDGQRTWDD
VWSNFPHHSSGTTED
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgcgtattcttctccgtctaatttcatcaagttccactggacaccatttccgcgctgga
ctcagctcgcgacaccaactctcagcgcagctatcaaccctgatccatccgttgaaaagc
cactcaccaccaatggccgcgaccgaggattccctccgcaaagcccttgccgagaagcag
tctgcggttgaagggcaaggcaatgctgttcgtgcactcaaagccgccaaagtgtctaag
gcggaaatcgacgctgcaatcggaactcttaatgctttaaagcttgagaagtcttcgatc
gagaagcagctccaagctgtcgtcagtggcaatggtcctgatagctccgtcagcaaagaa
gcatttcgtcaagctgtggttaacactctggaaaggcgtttgttttacattccatcgttc
aagatttatagaggtgtcgctggcctttacgattatgggcctcctggttgcgctgttaag
tccaatgtccttgctttctggcgccagcattttgttctcgaggagaacatgttggaggtt
gactgcccatgcgtgacccctgaggttgtcctcaaagcatctggtcatgtggataagttc
acagatcttatggttaaggatgagaaaactgggacctgttatcgggctgatcacttgtta
aaagatttctgtaatgagaagcttcaaaaagatctttccataactgcagagaaggctgcg
gaacttaaacatgttcttgcggtattggatgatctctcggctgaagagctcggtgcaaag
atcaaggagtatggcattgtcgcccccgacacaaaaaatcccctttcggatccttatcca
ttcaacttaatgtttcaaacgtcaattggcccatctggtctgattcctggttatatgcgt
cctgaaacagcacaaggcatatttgtaaactttaaggacttgtactactacaatgggaac
aaactcccttttgctgctgctcaaattggtcaggctttcagaaatgagatttctcctcgt
caaggccttctaagagttcgtgaattcacattagcagagattgagcattttgttgatcct
gaagacaaatctcacccaaaataccctgaagttgcagatcttgaatttctgatgttccca
agggaagagcaaatgtctggccagtctgcaaagagaattcggcttggtgaagcagtttcc
aaggggattgtcaacaatgaaactcttggctattttattgggagagtttatctcttcctg
actcgtcttggtatagacaagaagcgactacgattcaggcagcatcttgcaaatgaaatg
gcccactatgctgcagactgttgggatgctgagattgagtgttcctatggttggattgag
tgtgttggtattgcagatagatctgcttatgacctgcgtgcgcactcggagaaaagcgga
gtcccccttgtggcccatgaaaaattttcagaacctagagaagtggagaaactggttata
gcgccggtgaagaaagagctgggccttgcatttaagggtaatcaaaaaatggtggttgaa
gctttggaggcaatgaatgaaaaagaggctatggaaatgaaagcctctctggaaaccaag
ggtgaagtggagttttatgtctgtactcttgagaaaaatgtgtgcattaagaagaatatg
gtcacaatttcaaaggagaagaagaaggaacaccagagagttttcactccatcagttatc
gagccatcttttggcattggacgaataatatattgcctctttgagcattctttctacaca
aggcccagcaaagctggggatgaacagttaaatgttttccaatttcctcctcttgttgcc
cctattaaatgcaccgttttcccactcgttcagaatcagcagtatgaggaggttgcaaaa
gtaatttccaggtcattgacagctgctggaatctcacataagatcgatatcacaggcact
tcaatcggcaaacgatatgcaaggacagatgaactgggtgttccatttgcaataactgtc
gattcaacatcctctgtgacaataagagagagggatagcaaggatcaaatccgtgttaat
gtggaagaagcggcatcagttgtgaagtcggtgactgatgggcagaggacatgggatgat
gtttggtcgaatttccctcatcactcttctggaacaacagaggattaa
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