KEGG   Manihot esculenta (cassava): 110621265
Entry
110621265         CDS       T05761                                 
Name
(RefSeq) signal recognition particle 54 kDa protein, chloroplastic isoform X1
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
mesc  Manihot esculenta (cassava)
Pathway
mesc03060  Protein export
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    110621265
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:mesc02044]
    110621265
Enzymes [BR:mesc01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     110621265
Secretion system [BR:mesc02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   110621265
  Eukaryotic Sec-SRP protein
   110621265
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N AAA_22 Zeta_toxin CLP1_P CbiA APS_kinase AAA_17 NTPase_1 AAA_16 cobW ParA AAA_18 AAA_30 nSTAND3 ArsA_ATPase 6PF2K Thymidylate_kin NPHP3_N KAP_NTPase AAA AAA_31 AAA_33 ATP_bind_1 ResIII KTI12 AAA_14 Fe-ADH BRCC36_C NB-ARC TctA AAA_24 AAA_25 Vps23_core AAA_19 PIF1 HyaE SLFN-g3_helicase TIP49
Other DBs
NCBI-GeneID: 110621265
NCBI-ProteinID: XP_021621162
LinkDB
Position
8:complement(2562667..2568877)
AA seq 572 aa
MEAIQLSTVASRHFSSTYLSRNNHRSFSLSKWRRTSSDFCSSWSGSCSVASLSSRNLFAK
EIWGWVNCKSVTIKRDFHGVVKAEMFGQLTSGLESAWSKLKGEEVLTKDNIAEPMRDIRR
ALLEADVSLPVVRRFVQSVSDQAVGVGLIRGVKPDQQLVKIVHDELVKLMGGEVSELVFA
KSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGV
PVYAEGTEVKPSEIAKRGLEEAKKKSVDVVIVDTAGRLQIDKAMMDELKEVKRVLNPTEV
LLVVDAMTGQEAAVLVSTFNLEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGE
RMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEDLQKKIMSAKFDFNDFLKQT
RAVARMGSMTRVIGMIPGMGKITPAQIREAEKSLKIMEAMIEAMTPEEREKPELLAESPA
RRKRIAQESGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSVPALSNLEDALKAEQKAPP
GTARRKRRSESRRQFADSASSRPSPRGFGSRN
NT seq 1719 nt   +upstreamnt  +downstreamnt
atggaggccatacagttatcgaccgttgcctcccgccatttctcctctacctatttatcg
agaaacaaccacagaagctttagcctctcgaaatggaggagaacttcatctgatttttgt
tcttcatggtctggttcctgcagcgtcgcttccctttcttccagaaatttgtttgctaag
gagatatggggctgggtgaattgcaagagcgttactatcaaaagagattttcatggcgtg
gtaaaagcggaaatgtttgggcagttaacaagcggccttgaatcggcttggagcaagctc
aaaggggaagaggttttgaccaaggataatattgctgagcctatgagggatatcaggaga
gctcttctagaagcagatgtgagtcttcctgttgttagaaggtttgttcaatcagtgagt
gaccaagctgttggtgttggtctcatacgaggagtgaaacctgatcagcagttggtcaag
attgtgcatgatgagcttgtgaaactgatgggtggggaggtgtctgaactggtttttgca
aaatctggccccactgttatactactggctggtctacaaggagttggaaagacaacagtt
tgtgcaaagttagctaattatctgaagaaacaggggaagtcttgcatgcttgttgctgga
gatgtgtacagacctgctgctatagaccaacttgtcatattgggagaacaggtaggtgtg
cctgtttacgctgaggggacagaggttaaaccttcagaaatagctaaaagaggcttggag
gaagcgaaaaagaaaagcgtggatgtggtcatagtggatactgctggaagactgcagata
gacaaggcaatgatggacgagctaaaagaagtgaagcgggtattgaatcccacagaagtg
ttgctggttgtcgatgcgatgactggccaagaagcagcagtgttggtttcaaccttcaat
ctcgaaattggtattacgggagccattttgacaaagctagatggggattctagaggtggt
gcagctctaagcgttaaagaggtatcagggaagccaatcaaacttgtagggcggggcgag
cgaatggaggatctggaacctttctacccagatcgtatggctggtcgcatcctaggaatg
ggagatgttctttcatttgtagagaaggcacaagaagtgatgcgccaagaagatgctgaa
gacttgcaaaagaaaataatgagtgccaagtttgacttcaatgatttcctaaagcaaact
cgtgcagttgcacgtatgggttccatgactcgtgtcatagggatgatccctggaatggga
aagattactcctgcacaaattcgagaagcagagaagagtttaaagataatggaagcaatg
attgaagcaatgactcctgaggaaagagagaagccagaactgttggctgaatctccagcg
aggaggaagagaatcgctcaggagtctgggaaaacagagcagcaggtgagtcaacttgtt
gctcaactcttccaaatgcgtgtccgcatgaagaatctaatgggcgtaatggagggtgga
tctgttcctgctctgagtaatcttgaggacgcacttaaagctgagcagaaggctcctcct
ggtactgcaagaaggaagaggaggtcagaatcaaggaggcaatttgcagactcagcgtca
tcaaggccaagtcctcgtggtttcgggtcaagaaattag

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