Manihot esculenta (cassava): 110621287
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Entry
110621287 CDS
T05761
Name
(RefSeq) autophagy-related protein 18a isoform X1
KO
K22991
WD repeat-containing protein 45
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mesc04131
]
110621287
Membrane trafficking [BR:
mesc04131
]
Autophagy
Other autophagy associated proteins
Others
110621287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
ANAPC4_WD40
BCAS3_WD40
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
PEP5_VPS11_N
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_HPS5
Beta-prop_RSE1_2nd
Beta-prop_IFT122_1st
DUF7099
Beta-prop_WDR35_TULP_N
VPS11_N
Motif
Other DBs
NCBI-GeneID:
110621287
NCBI-ProteinID:
XP_021621204
LinkDB
All DBs
Position
8:complement(35807808..35810499)
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AA seq
410 aa
AA seq
DB search
MAQPHHARTATHHIPPDSDSEPDDHTSSSSSPPLFLPCTTHEPAQSPAIYHLSFNQDYGC
FAAGLDNGFRIYNTDPFKPLFRRDLDSRAGIGLVAMLFRCNILCLVGGGPDPIHPMSKVM
IWDDHQSRCIGELSFRSEVKNVKLRRDRIIVVLLQKIFVYNFADLKLLHQIETVLNPKGL
CEISHTSSPMVLVCLGLQKGQIRVENYGSKRTKFVMAHDSRIACMTMTQEGRLLATASSK
GTLIRVFNTLDGSLLQEVRRGADRAEIYSLAFSSNAQWLAVSSEKGTVHVFSLKVDSGLV
TLTDDRLHVASEPNHSNGSGISSLSILKGVLPKYFSSEWSVAQFRLPEGLQYFVAFGHQK
NTIVIIGMDGSFYRCEFNPGSGGEMTQLEYHNFLNVDNFLKLGETFLKSM
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggctcagccccaccacgctcgcaccgccacccaccacatccctccggattccgactct
gaacccgacgatcatacctcctcctcatctagcccccctctatttctcccttgtactacc
cacgaacccgcacaatccccggccatctaccatctctccttcaaccaagattatggctgc
ttcgccgccggcctcgacaacggttttagaatatacaataccgatcccttcaagcctctc
tttcgccgggatcttgactcgagggccggaatcggccttgtggccatgctcttccggtgc
aacattctttgcttggtcggcggtggtcctgatcccatacatccaatgagcaaggtaatg
atttgggacgaccatcaatcgcgatgcatcggagagctatctttccgatcagaggtgaaa
aacgtgaaacttcggcgggacaggataattgttgtattgcttcagaagatttttgtgtac
aattttgcggacctgaagctgctgcaccaaatcgagacggttttgaacccaaaagggttg
tgtgagatatcccatacttcatcaccgatggtacttgtttgccttggccttcagaagggg
caaattagagtggaaaattatgggtccaagagaaccaagtttgttatggcacatgactcg
aggatcgcttgtatgactatgactcaagagggcagattgttggctactgccagtagtaag
ggcactttgattagggtgtttaatactttggatgggtcattactgcaggaggttaggaga
ggtgctgatagagctgaaatatacagtcttgcattctcttccaatgcacagtggttagcc
gtctcaagtgagaagggaactgtccatgtatttagcctcaaagttgattcaggtttggtg
acattgaccgatgatagattgcatgttgcatctgaaccaaaccattctaatggttcaggc
atttcgtctctttccattttgaaaggtgtattgccaaagtatttcagctcagagtggtca
gtggctcagtttcgattacctgaaggattgcaatattttgttgcatttggccatcagaag
aacacaattgtaatcattggcatggacggaagcttctatcgatgtgagtttaacccagga
agtggcggagagatgactcagcttgaatatcacaatttcctgaatgtagacaatttctta
aagctaggggaaacttttctcaagtcgatgtaa
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