Manihot esculenta (cassava): 110621301
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Entry
110621301 CDS
T05761
Name
(RefSeq) transcription factor-like protein DPB isoform X1
KO
K04683
transcription factor Dp-1
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
110621301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mesc03000
]
110621301
03036 Chromosome and associated proteins [BR:
mesc03036
]
110621301
Transcription factors [BR:
mesc03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
110621301
Chromosome and associated proteins [BR:
mesc03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
110621301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DP
E2F_TDP
Filament_head
CENP-F_leu_zip
Motif
Other DBs
NCBI-GeneID:
110621301
NCBI-ProteinID:
XP_021621224
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All DBs
Position
8:1272234..1284247
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AA seq
356 aa
AA seq
DB search
MVTGGTHQDDGDKNHPPATTVSRAGTTRSWGNTTVSGQSVSTSGSVGSPSSRSEHAMPTP
ASDSTFLRLNHLDIHADDAATQDAAANKKKKRGQRATGADKSGRGLRQFSMKVCEKVESK
GTTTYNEVADELVAEFADPSNSVSSPDQQQQYDEKNIRRRVYDALNVLMALDIISKDKKE
IQWKGLPRTSLSDIEELKAERLGLRNRIEKKTAYLQELEEQYIGLQNLIHRNEQLYSSGN
APSGGVSLPFILVQTRPHATVEVEISEDMQLVHFDFNSTPFELHDDNYVLKAMKFCERPQ
SDDTAANLANDGGEGCSMSNMIQQQILPNPGTSTPIRPPTSPPIPGIIKARVKHEH
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggtcactggtgggacccaccaggatgatggggacaagaaccaccctcccgctaccacc
gtttctagagccggcaccaccaggtcttggggcaacactactgtctccggtcaatcggtt
tccactagcggcagcgtcggttctccttccagccggagcgagcatgccatgcctacgcct
gccagtgacagcacttttcttaggttgaaccatcttgacattcacgctgacgatgccgcc
actcaagatgccgccgccaacaagaagaagaaaagaggtcaaagagcaactggagctgat
aagagtggtagaggactccgccaatttagtatgaaagtatgtgaaaaagtggaaagcaaa
ggaacaactacttacaatgaggttgcagatgaacttgttgcagagtttgctgaccctagc
aacagtgtttcatctccagatcagcagcaacaatatgatgagaaaaacatacggcgaagg
gtatatgatgccctgaatgtactcatggcattggatatcatatctaaggataaaaaggag
atacaatggaagggtcttcctcgaactagcctgagtgatattgaagaattaaaggctgaa
cgtcttggattgagaaataggattgagaagaaaactgcctatttacaagaactggaggaa
caatacataggtcttcagaacctgatacatcgaaatgagcaactatacagctcaggaaat
gctcctagcgggggtgtgtctttaccttttatattggttcagacgcgccctcatgcaact
gttgaagtggaaatatcagaagatatgcagctggtgcattttgactttaatagcacccct
tttgagctgcatgatgataattatgttctcaaagcaatgaaattttgtgagagaccacag
agtgatgatacggcggccaatctagctaatgatggaggtgaaggttgtagcatgtccaac
atgatccaacagcaaatccttcctaacccaggaactagtacaccaattaggccgcccact
tcaccgcctattcctggaattataaaagcacgtgttaagcatgagcattga
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