Manihot esculenta (cassava): 110621654
Help
Entry
110621654 CDS
T05761
Name
(RefSeq) probable serine/threonine protein phosphatase 2A regulatory subunit B''gamma isoform X1
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03015
mRNA surveillance pathway
mesc04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110621654
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
110621654
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mesc01009
]
110621654
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesc03019
]
110621654
03036 Chromosome and associated proteins [BR:
mesc03036
]
110621654
Protein phosphatases and associated proteins [BR:
mesc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
110621654
Messenger RNA biogenesis [BR:
mesc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
110621654
Chromosome and associated proteins [BR:
mesc03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
110621654
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
P2R3B_EF-hand
Phage_Inh_C
DUF4187
wHTH-Calcineurin_assc
Motif
Other DBs
NCBI-GeneID:
110621654
NCBI-ProteinID:
XP_021621614
LinkDB
All DBs
Position
8:37606649..37620536
Genome browser
AA seq
537 aa
AA seq
DB search
MDTVGDVAMLDAELLQLPEVAPLSLKSYPDFAQKLFEQWLALPDANRLVTSLLSDAKAGV
PLNVSGNSPKANTTTSSSLPSMFPGGSTPPLSPRSTSGSPRIMKQRAGPSNLGSPLKVVS
EPVREFIPQFYFQNGRPPPNELREQCLFRISHFFYGRSDGLQLHEFKSVTKEICKLPSFF
SAVLFRKIDVNGTGFVTRDAFVNYWINGNMLTMDTATQMFKILKQPDLKYLTQEDFKPIL
RELLATHPGLEFLQSTPEFQERYAETVIYRIFYYINRSGNGHLTLRELKRGNLIDAMQHA
DEEEDINKVLRYFSYEHFYVIYCKFWELDMDHDFLIDKENLIRYGNHALTYRIVDRIFSQ
VARKFTCKVEGKMGYEDFVYFILSEEDKSSEPSLEYWFKCIDLDGNGVLTRNEMQFFYEE
QLHRMECMAQEPVLFEDILCQIIDMIGPENESYITLSDLKGCKLSGSVFNILFNLNKFMA
FETRDPFLIRQERENPTLTEWDRFAHREYIRLSMEEDVEDASNGSADVWDESLEAPF
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggatactgttggcgatgtggcgatgctggacgcagagttgttacaattgccggaggtg
gctcctttgtccttgaaatcgtacccggactttgcacagaagcttttcgagcagtggctc
gcgctccctgacgctaaccggctggtgacatcattgcttagtgatgcaaaggcaggcgtt
cccttgaatgtctctggaaactctcctaaagcgaatactaccacaagcagttctttacct
tccatgtttcctggaggaagtactccgcctctttctcctagaagtacatctgggtcccct
cgtataatgaaacagagagctggcccttctaatttaggttctcctctgaaggtagttagt
gagccagtgagggagttcatacctcagttttacttccaaaatggtcgtccacctccaaat
gaactaagggaacaatgtttgttcaggatcagtcactttttctatggccgttcagatggg
ctgcagttacatgaattcaaatctgtcaccaaggaaatttgcaagctgccctcattcttc
tctgcagttcttttcaggaagattgatgtcaatggcactggttttgtgacaagggatgcc
ttcgttaattattggataaatggcaacatgctgacgatggatacagcaactcaaatgttt
aaaattctaaagcaaccagatctcaaatacctcactcaggaagacttcaaacctattctt
cgagaactattggcaactcatccagggttggaattcttacagagcacaccagagtttcag
gaaagatatgctgaaactgtaatctacagaatattttactacataaatagatctgggaat
ggtcatcttaccctcagggagctgaaacgtggaaacttgattgatgcaatgcagcatgca
gatgaagaagaggacataaataaagttttaaggtacttctcttatgaacatttttatgtg
atatactgcaagttttgggaactggatatggatcatgattttctgatcgacaaagagaac
ctgatcagatatggtaaccatgcgcttacgtaccggattgttgataggatcttttcccag
gtcgcaagaaagtttacttgtaaggttgaagggaagatgggatatgaagattttgtctac
ttcatactgtcagaggaggataagtcgtctgaaccaagtcttgagtactggttcaagtgc
atagatttggatggaaatggagttttgacacgaaatgaaatgcaattcttttatgaagag
cagttgcatcgaatggaatgcatggcccaagagcctgtgctgtttgaagacatattatgc
cagataattgacatgattggaccagagaatgagagctatatcacattaagtgacctgaaa
ggttgtaaactttcaggaagtgtgttcaatatccttttcaaccttaacaagtttatggcc
tttgaaactcgtgatccgtttctgattcgccaggagcgtgagaatccaacattgacagag
tgggatcggtttgcacatagggaatatattaggctttcgatggaggaagacgttgaagat
gcctctaatggaagtgcagatgtctgggatgaatcacttgaggctccattttga
DBGET
integrated database retrieval system
