Manihot esculenta (cassava): 110621781
Help
Entry
110621781 CDS
T05761
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00040
Pentose and glucuronate interconversions
mesc01100
Metabolic pathways
Module
mesc_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110621781
Enzymes [BR:
mesc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
110621781
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
110621781
NCBI-ProteinID:
XP_021621775
LinkDB
All DBs
Position
8:5113321..5116588
Genome browser
AA seq
465 aa
AA seq
DB search
MIMALQGLHLSPFFIILLLSIIFVIIIPCYYCLPGDTLNHYLEEQGGEAFGYHYSQAYPS
YFSSIEDSQFKDFIKLRSSNVLNLKIFDKVGSTSTSVKTVNVDDYRANTDSADDTKAFEK
AWEEACSSKGAVLVVPKNRYRVKPVRFSGPCKSNLTVQIYGVIEASDDRSDYKKDDRHWL
VFDGVENLLVEGGGTIDGNGKIWWQNSCKVDKDLPCRDAPTALTFYECKNLVVDNLKIQN
AQQMHISFEGSKDVQVSNLSITSPEHSPNTDGIHVTRTQNIYITNSVIATGDDCISIVSG
SQNVHAMDITCGPGHGISIGSLGSGKSRAYVSGVTIDGAKLSGTRNGVRIKTWQGGSGVA
RDIKFQNIEMQNVRNPIIIDQYYCDHKSCNEQRSAVEVKNVMYKNIKGSSASEVAIKFDC
SKAYPCQGILLQDVILEREAEDQKAKALCYNVNLVEKGVVSPHCP
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgattatggctttacaaggacttcatctttctccattcttcatcattcttcttctctct
attatttttgttatcattatcccttgttattattgtttgccaggagatacccttaatcat
tatcttgaagaacaaggaggagaagcttttgggtatcattattctcaagcttatccttct
tattttagttccattgaggatagccagttcaaggacttcatcaagttaagatctagtaat
gttcttaatttgaagatatttgacaaagtaggtagcacatcaacttcagttaaaaccgtt
aatgttgatgattatcgtgctaatacagacagcgccgatgatacaaaggcatttgaaaag
gcatgggaggaagcttgttcgtctaaaggagcagttcttgttgtgccgaaaaacaggtac
cgtgtgaagccggttagattctcaggtccatgcaaatccaatctcacagtgcagatatat
ggagtaattgaagcatcagatgatcgatcagactataagaaagatgatagacactggctt
gtgtttgatggagttgagaatttgctagttgaaggtggtggaactattgatgggaatggc
aagatttggtggcaaaactcatgcaaagttgataaggatcttccctgcagggacgcccct
acggctctcactttctatgaatgcaagaatctggtggtggataacttgaaaattcaaaat
gcacaacaaatgcatatatcttttgaaggcagcaaggatgttcaagtctccaatcttagt
ataacttcacctgaacatagccccaacacagatggaatccatgtaacacgtacccaaaac
atctacattactaattcagtcatagcaacaggtgatgattgcatctctattgtaagtggg
tcgcaaaatgtgcatgccatggacataacctgtggaccaggtcatgggataagtattgga
agcttaggctctggcaaatcaagagcttatgtttcaggagtaacaattgatggtgctaag
ctttctggtactcgcaacggtgttaggatcaaaacatggcagggaggatcaggagttgct
agagacatcaagtttcaaaatattgaaatgcaaaatgtgagaaatcccattataatagat
cagtactattgtgatcataaatcatgcaacgaacagcgatcagcagttgaagtgaaaaat
gtgatgtacaagaacataaaggggagcagtgcttctgaagtagctataaaatttgattgc
agcaaagcttatccatgtcaagggattttgttgcaagatgttatcctggaaagagaagca
gaggatcaaaaagcaaaagctttatgttacaatgttaatttggttgaaaaaggagttgtt
tctccacattgtccatga
DBGET
integrated database retrieval system
