Manihot esculenta (cassava): 110621935
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Entry
110621935 CDS
T05761
Name
(RefSeq) syntaxin-43 isoform X2
KO
K08489
syntaxin 16
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
110621935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mesc04131
]
110621935
Membrane trafficking [BR:
mesc04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
110621935
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNARE
Syntaxin_2
FlxA
Prominin
EF-G-binding_N
GCP_C_terminal
MCPsignal
Motif
Other DBs
NCBI-GeneID:
110621935
NCBI-ProteinID:
XP_021621930
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All DBs
Position
9:36640780..36645610
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AA seq
325 aa
AA seq
DB search
MATRNRTILFRKYRDALKSVRAPASSSAHLTTSKNSGGRPVIELVSTSLLQNRSYAPLST
EDPGNSSKGALTVGLPPAWVDVSEEIAANVQRARSKMTELARAHAKALMPSFGDGKEDQR
MIEALTHEITDLIKKSEKKLQRLSAAGPSEDSNVRKNVQRSLATDLQNLSMELRKKQSTY
LKRLRQQKEGQDGVDLEMNLNGSRSGIDDDNLDYMVFNERQMAKLKKSEAFTAEREREIQ
QVVESVNELAQIMKDLSVLVIDQGTIVDRIDYNIQNVATTVEEGLKQLQKAERTQKQGGM
VMCATVLVIMCFIMLVLLILKEIFL
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgaggaataggaccatattatttaggaagtatagagatgcgttgaagagcgtt
agagctccggcgagttcgtcggctcatttgacaacatccaaaaattccggcggacgaccg
gtgatcgagttagtgagcacgtcgcttctccaaaatcgctcttatgctccacttagtact
gaggatcccggtaactctagtaaaggtgcactcacagttggtctaccaccagcttgggtg
gatgtatctgaagaaatagctgcaaatgtgcagcgtgcacgctcaaaaatgaccgagtta
gccagggctcatgctaaagctttgatgccttcatttggagatggtaaagaagatcaacgc
atgattgaggctctaactcatgagataactgatcttataaaaaaatcagagaagaaatta
caaagactttcagcagctgggccttctgaggattcaaatgtgaggaaaaatgtacagcgc
tctcttgccaccgaccttcagaacctttcaatggaacttcgtaagaaacagtcaacgtac
ttgaagcgcctcaggcaacagaaagagggtcaggatggggttgatttagagatgaaccta
aatggtagtagatctggaatagatgatgataatttggattacatggtgtttaatgagcgg
caaatggccaagctgaaaaagagtgaggcattcacagcagaaagagaaagagagatccag
caggttgttgaatcagtaaatgagcttgctcaaattatgaaggacttgtcagtacttgta
atagaccagggcactattgttgataggatagattacaacattcagaatgttgcaactaca
gttgaggagggtcttaaacagttgcaaaaggctgagagaacacagaaacaaggagggatg
gtgatgtgtgcaacagtgcttgttatcatgtgctttatcatgttggtgctactaatcctc
aaggagatattcttgtaa
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