Manihot esculenta (cassava): 110621962
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Entry
110621962 CDS
T05761
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isoform X1
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110621962
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mesc01009
]
110621962
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mesc03021
]
110621962
03019 Messenger RNA biogenesis [BR:
mesc03019
]
110621962
03041 Spliceosome [BR:
mesc03041
]
110621962
Enzymes [BR:
mesc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
110621962
Protein phosphatases and associated proteins [BR:
mesc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
110621962
Transcription machinery [BR:
mesc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
110621962
Messenger RNA biogenesis [BR:
mesc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
110621962
Spliceosome [BR:
mesc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
110621962
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
110621962
NCBI-ProteinID:
XP_021621964
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All DBs
Position
9:complement(34662977..34669288)
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AA seq
350 aa
AA seq
DB search
MDQAVLDDIIRRLLEVRGKPGKQVQLSEAEIRQLCVVSREIFLQQPNLLELEAPIKICGD
IHGQYSDLLRLFEYGGLPPHANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGN
HECASINRIYGFYDECKRRFNVRLWKIFTECFNCLPVAALIDEKILCMHGGLSPDLHNLD
QIRNLPRPTDVPDTGLLCDLLWSDPSKDVEGWGMNDRGVSYTFGPDKVTEFLEKHDLDLI
CRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPVDKRSK
FNFGSTATAKPGNTSGVGVFGSTTTAKPGNSPAGVKESFSALQSFLGAKV
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggaccaagcggttctcgatgatattatcaggcgtcttttagaagtcaggggcaagccc
ggcaagcaggttcagttatcggaggccgagatccggcaactatgtgttgtgtctagagag
attttcttgcaacagcctaatttgttggagcttgaagcacccatcaagatttgtggtgat
atccatggtcaatattctgatcttctaaggctgtttgaatatggtggattacctccacat
gcaaactacttgtttttgggggattatgttgatcgaggcaagcaaagtctagaaacaata
tgtcttctccttgcatacaaaataaaatatcctgaaaacttcttccttctgaggggaaac
catgaatgtgcttcaataaaccgcatatatggtttttatgatgagtgtaagagaagattt
aatgttaggttgtggaagatattcacagaatgttttaactgcctaccagtggcggctcta
attgatgagaagatcctgtgcatgcatggtggtctttctcctgaccttcataacttggat
cagattagaaacttgccacgccccactgatgtgccagatacaggtttgctttgtgatctt
ctctggtcagatcctagtaaagatgttgaaggttggggaatgaatgacaggggagtttca
tatacctttggccctgacaaagtgacagagtttcttgagaagcatgatttggatctcatt
tgccgtgctcaccaggttgtggaggatggatacgagttctttgccaacaggcaacttgta
actatattttcagctcctaattattgtggagaatttgataatgctggtgccatgatgagc
gtggatgagactctaatgtgctctttccaaatattaaagcctgttgataaaaggtcaaaa
tttaactttgggagcacagccacagcaaagcctggaaacacttctggagttggtgttttt
gggagtacaactacagccaaacctggaaactctccagctggagtgaaggaatccttttcg
gcgttgcagtcgttcctgggtgcaaaagtataa
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