KEGG   Manihot esculenta (cassava): 110622019
Entry
110622019         CDS       T05761                                 
Name
(RefSeq) protein SMG9 isoform X1
  KO
K18735  protein SMG9
Organism
mesc  Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mesc03019]
    110622019
Messenger RNA biogenesis [BR:mesc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Other surveillance factors
     110622019
SSDB
Motif
Pfam: NB-ARC MMR_HSR1 ABC_tran AAA_18 RsgA_GTPase AAA_16 DUF5906 MeaB nSTAND3 AAA_22 DO-GTPase2 Spore_III_AA FeoB_N Ploopntkinase3 AAA_28 AAA_29
Other DBs
NCBI-GeneID: 110622019
NCBI-ProteinID: XP_021622044
LinkDB
Position
9:32702372..32706478
AA seq 407 aa
MAGSTGGTASSSPSPAPPAPKILLAKPGLVTTGPVVGKFGRGGAEDETVPHRSRLPAIGS
LNLLSDSWEFHIDRFLPFLTENTDFTVIGIIGPPGVGKSTIMNELYGFDGGSTGMLPPFT
IQSEDNRAMARHCSVGIEPRISAERLILLDTQPVFSPSVLAEMMRPDGSSTISVLSGENL
SAELAHELMAIQLGVLLASICHVLLVVSDGVHDDNMWHLLLTVDLLKHGIPDPSSHLLSS
TVGSEKENKDKLFEGEEYMATPVFVHTKLQDQNVTPHNLMQLRKALAQYFSSSSFIRERC
GSMAKENFFSSTASNTQGDDFHAMPLKLFLIPSKNKDDLPRAQHESYNSALWKLRDEVLS
MNCPSFARTVSERDWLKNSAKIWELVKSSSVIAEYSRTLQNSGMFRR
NT seq 1224 nt   +upstreamnt  +downstreamnt
atggcaggttctactggtggcaccgcttcttctagtccctcaccggcccctccggctcct
aaaatcctattggctaagcccggactggttaccactggaccggtggttggtaaatttgga
cgcggcggtgccgaagacgaaacggtgccacatcggtctcgtctgcctgcaattgggtct
ctcaatctcctctctgattcctgggaattccacattgatcgctttcttccttttctgact
gagaatacagatttcactgtgatagggataattgggccacctggagttggcaagtccacc
atcatgaatgagctttatggctttgatgggggttcaaccggaatgctaccaccgtttact
atacagtcagaagataacagagcaatggcaagacattgtagcgtaggcattgaaccaagg
atatctgctgagcgtcttatactgcttgacacccagccggtttttagcccatctgtactg
gctgagatgatgagacctgatggttcttcaacaatatcagttttgagtggtgaaaatcta
tctgctgaattggcacatgaacttatggctattcagcttggtgttcttctagcatccatt
tgtcatgttctgctcgtggtatcagatggagttcatgatgataatatgtggcatttgttg
ttgacggttgacctgttgaaacatggcatacctgatccatcttcacatttgctgagctca
actgtggggtctgagaaggaaaacaaagacaaactttttgagggtgaagaatatatggct
actccagtctttgtgcatacaaaattgcaagatcaaaatgttaccccgcataacttaatg
caactgaggaaggcacttgcacaatacttcagctcctcttcgttcatcagagagagatgc
ggaagcatggcaaaggagaatttcttttcttccacggcttctaacactcagggtgatgat
tttcatgctatgccactgaaattatttttaatcccatctaaaaacaaagatgatttgcca
agggcacagcatgaaagttacaactctgcactatggaaactgcgcgatgaggttttatcc
atgaattgcccttcctttgcaaggaccgtctcagaacgtgactggctgaaaaattctgca
aagatatgggaactagttaaaagctcttctgtcattgctgagtatagccgaacacttcaa
aactcaggcatgtttaggagatag

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