Manihot esculenta (cassava): 110622038
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Entry
110622038 CDS
T05761
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mesc04121
]
110622038
Enzymes [BR:
mesc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110622038
Ubiquitin system [BR:
mesc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110622038
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4_2
zf-ANAPC11
zf-C3HC4
zf-rbx1
zf-UDP
zf-RING_5
zf-C3HC4_3
zf-RING_11
zf-RING_4
zf-Nse
RNase_Y_N
Motif
Other DBs
NCBI-GeneID:
110622038
NCBI-ProteinID:
XP_021622077
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All DBs
Position
9:complement(10743521..10749681)
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AA seq
616 aa
AA seq
DB search
MAQPYESDEENDAAFVYPGFEFEEETENHLESEEEEDDEEYIPVVNSPRVVGNVSLNPGR
VSVEEERSKRRRAEHGGEGGGETCSLIADENAESSQGREWNRTQIDGLFCPICMDAWTSE
GDHHISCLPCGHIFGLSCISRWLKQSRSSAKCPQCNRKCTLKDVRKLFAPRIAVIDEESQ
KTIRSLEVKCASLEKKSADWCRKESEWQKREAELQLKVNQLTERTTYLEHLVEDMQSRSN
VPFTAGRNSQGHKIPGIINSKLCCRGSSSIFVLERELQVDGARLFDIDAFGQILLLVRRL
PKIGGSHVLTKMNLLPPHESEDILLPSSMKIIKDLHISPFNGSHALCASLGEKLSVLSME
SNSVILSYDLLGPAWSCCWDLHSSYYMYAGLQNGLLLAFDMRQTRGPVESSPGLTNNPIH
TLYSVQSNSSSGVRTLLSASSIGICQWNFGSTEERPSLVPQTANQGVCISLAHCLSGDDV
VVTFRPKVEMTNEMAYSQSSLTPCSISGRGVLGSHLHLKRVGDKYEQLGISCATVSNIQL
PRSVIVDRENEKPLFAAGDEETLGLILQELPTFKFDQSLKSHKHHICDVKYTSTLTQGLL
GCLSEDRLQLYSSKMR
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggcccaaccgtacgaatccgatgaagagaacgatgccgcattcgtctaccctggcttt
gaattcgaagaagagacggaaaatcacttggaaagcgaagaggaggaggacgacgaggag
tatattccggttgtaaactcgcctagggttgtaggtaatgtctctttgaatcccggtcga
gttagtgttgaagaagagagaagtaagcggagaagagcagagcacggaggagaaggagga
ggagagacgtgctcgttgattgcagatgagaacgctgagagttctcagggaagagagtgg
aatcgaactcaaatcgatgggcttttttgccctatttgcatggatgcttggaccagtgag
ggggaccatcacatcagctgtcttccttgcggccatatattcggactttcttgtatcagt
agatggttgaaacaaagtcgaagttccgcaaagtgtcctcaatgcaacaggaaatgcaca
ttaaaggatgtgaggaagctctttgctccaaggattgctgtgattgatgaagaatcgcag
aagacaattagatctctggaggtgaaatgtgcttctcttgagaagaagagtgctgattgg
tgtagaaaagaatctgaatggcaaaagagagaagctgagttgcaacttaaggtcaaccag
ctcacggagaggactacttatttggagcatttagtagaagatatgcagagcaggtcaaat
gtgccatttactgctggtaggaacagtcaaggacataaaatacctggaattatcaactca
aagttatgctgcagaggatcgtctagtatttttgtgttagagagagagttgcaggtggat
ggtgcccgcttatttgatatagatgcatttggtcagattttgttacttgttcggaggcta
cctaagattggtgggtcacatgtacttaccaaaatgaacttgctacctcctcatgaaagt
gaagatattttgcttccttctagcatgaaaatcataaaagacttgcatatttctcctttt
aatggaagtcatgcgctttgtgcttcattaggcgagaaactatcagttcttagtatggaa
agcaacagtgtcatcctttcctatgatttactgggtcctgcttggtcatgttgctgggat
cttcatagttcatattacatgtatgctggactacagaatggcttgcttttggcatttgat
atgcgtcaaaccaggggaccagtagaatcaagtccaggactgacaaacaatccaatccat
acattatactctgttcaaagtaattcttcttctggtgttagaacgcttctatctgcttcc
tccattggcatatgccagtggaacttcggcagtactgaagaaaggccatctttggttcct
caaacagcaaatcaaggagtttgtatatcccttgctcattgtctgagcggtgatgacgta
gtggtgacatttcgtcccaaagtcgagatgaccaatgagatggcttattctcagtcatca
ctcactccttgctcgataagtggacgaggagtgcttggttcccatcttcatttgaagaga
gtgggtgataagtatgaacagttgggcatttcatgtgccactgtaagtaacattcagttg
cctagatctgttatcgtagacagggagaacgaaaaaccactatttgcagctggggatgaa
gaaacattgggattgatcttgcaagagttgccaactttcaaatttgatcaaagtcttaaa
tctcacaagcatcatatttgtgatgtgaagtatacaagtacactaacccaaggtttactt
ggctgtttgagtgaggacagattgcaactgtacagtagcaagatgagatga
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