Manihot esculenta (cassava): 110622051
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Entry
110622051 CDS
T05761
Name
(RefSeq) transcription factor CSA
KO
K09422
transcription factor MYB, plant
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mesc03000
]
110622051
Transcription factors [BR:
mesc03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
110622051
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
DUF6581
NUDE_C
Motif
Other DBs
NCBI-GeneID:
110622051
NCBI-ProteinID:
XP_021622094
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Position
9:33627580..33630339
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AA seq
384 aa
AA seq
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MSVQHLRSESNSFSRYQNVNFLPPPAASHLSLATFGVMSKRRDTETVPPQMGFHISSHSM
DQKGRQWSIQQVENRGTKRPHDGSDGIFGVQKKDLSLDIGEEEEPKSCATGKNGHTKLCA
RGHWRPAEDAKLKDLVAQYGPQNWNLIAENLEGRSGKSCRLRWFNQLDPRINRRAFTEEE
EERLLSAHRLYGNKWAMIARLFPGRTDNAVKNHWHVIMARKHREQSSIYRRRKPSSSSQI
APPIKGLDVNSQKNACSESTTISSTIDESASTCTDLYLSPSSTKAPPMLFTRFSPQGAPM
GPFAEKEVAMGNVELDKLYLSRGKGFYQAGSIGLVTGLDQSGQSDSNSEVSASESVGTNG
IGDNENRSQKINVTFIDFLGLGAT
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtacaacacctaaggagtgagagtaatagtttcagccggtatcaaaacgttaac
tttctgcctccacctgcagcttctcatctctctcttgctacatttggggtaatgagtaag
cgtagggacacagaaaccgtacctcctcaaatggggtttcacatttctagtcattcaatg
gatcaaaaaggaaggcagtggagtattcaacaggtagaaaacaggggaacaaagagacct
catgatgggagtgatggcattttcggggttcaaaagaaagatctttctttggatataggt
gaagaagaggagcctaagagctgtgctactggtaaaaatgggcacacaaagctttgtgcc
cgaggccattggagacctgctgaagatgccaaactcaaagaccttgtggcgcaatatggt
cctcaaaactggaatttgattgcggagaatcttgaagggagatcagggaagagctgtaga
ttaaggtggttcaaccagctggatccaagaataaacaggagggctttcactgaggaagaa
gaggagagactcttatctgctcatagattatatgggaacaaatgggctatgattgctaga
ctcttccctggcaggactgataatgcagtgaagaaccattggcatgtgattatggcaagg
aaacatagagaacaatccagcatttacaggagaaggaagccttcttcttcctctcagatc
gccccacccattaagggacttgatgttaattcgcagaagaatgcttgcagtgaatcaaca
accatatccagcaccattgatgaatctgcttcaacatgtactgatctctaccttagccct
tcttcaaccaaggcacctcctatgcttttcactaggttcagtccccaaggagctcccatg
ggtccatttgctgagaaggaagtggcaatgggaaacgtggaacttgacaagttgtatctg
agtaggggcaaagggttctatcaagctgggtccattggactggttactgggttggaccaa
tctggtcagtcagattcaaactcggaagtgtctgcaagtgagtcagttggcaccaacggg
atcggtgacaatgaaaataggagtcagaaaataaatgtgaccttcattgacttcctcggt
ctaggagctacataa
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