Manihot esculenta (cassava): 110622147
Help
Entry
110622147 CDS
T05761
Name
(RefSeq) protein HASTY 1 isoform X1
KO
K14289
exportin-5
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110622147
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mesc03016
]
110622147
03036 Chromosome and associated proteins [BR:
mesc03036
]
110622147
Transfer RNA biogenesis [BR:
mesc03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
110622147
Chromosome and associated proteins [BR:
mesc03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
110622147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
Motif
Other DBs
NCBI-GeneID:
110622147
NCBI-ProteinID:
XP_021622244
LinkDB
All DBs
Position
9:35476088..35486266
Genome browser
AA seq
1207 aa
AA seq
DB search
MEETSGNNIANNVARAIVAALDWNSTPDARKAAVSFLDSIKTGDVRVLANVSFLLVKKDW
SSEIRLHAFKMLQHLVRLRWEELNPVERRNFANIAFELMSEIANSSEEWALKSQTAALVA
EIVRREGVELWQELLPSLVSLSGKGPVQAELVAMMLRWLPEDITVHNEDLEGDRRRLLLR
GLTQSLPDILPLFYNLLERHFGAALHEVGRQQLDSAKQHAATVTATLNAINAYAEWAPLP
DLAKFGVIHGCGFLLSSTDFRLHACEFFRLVSPRKRPVDASASEFDSAMSNIFQILMNIS
REFLLKSGSSTGVIDESEYEFAEYICESMVSLGSSNLQCISSDSSILSLYLQQMLGYFQH
YKLALHYQSLLFWLVLMRDLMSKPKATMLSPGDGSSTNNVGCASGQVDNEKTKILSLMND
DICSAILDITFQRMLKREKIGASLSLGALELWSDDFEGKGDFSQYRFKLSELMKFVASFK
PLISSAKISERILSIISSLSISAISVQELAVMESTQVALENVVSAIFDGSHEYSGGRSEV
HLALCRIFEGLLQQLLSLKWTEPALVEVLGHYFDALGPFMKYFPDAVGSVINKLFELLTS
LPFVVKDPSTSSARHARLQICTSFIRIAKAADRSVLPHMKGIADTMAYMQREGCLHRSEH
NLLGEAFLVMASAAGIQQQQEVLAWLLEPLSQQWIQLEWQNNFLSEPLGLIRLCSETPFM
WSIFHTVTFFEKALKRSGTRKGNVNLQNSSTGSTSLHPMSSHLSWMLPPLLKLLRAIHSL
WSPSIYQALPGELKAAMTMSDAERFALLGEGNPKLPKGSLTSADGSQVGMTKEGYAEANE
SDIRNWLKGIRDSGYNVLGLSMTVGDPFFKCLDVDYVGIALMENIQSMEFRHIRQLVHSV
LIYLVKSCPSETWEVWLEKLLYPLFLHVQQVLHFSWSSLLHEGKAKAPDVHGMLAASDLK
VEVMEEKLLRDLTRETCLLLSSIASPGLNSGLPSLEQSGQVSRADISSLKDLDAFASNSM
VGFLLKHKGLALPALQICLEAFTWTDSEAVTKVSSFCAHVVLLAIATNNVELQEFVSKDL
FYAIIKGLELESNAVISADLVGLCREIFIYLRDRDPAPRQVLLSLPCITTQDLYAFEEAL
TKTSSPKEQKQHLKSLLLLATGNKLKALAAQKSVNIITNVTARSRTAVTASETRIDEGDS
VGLAAIL
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atggaagagactagcggcaataacatagcaaataatgtggctcgagccattgttgcagct
cttgactggaactccactcccgatgctcgcaaagccgctgtctctttcctcgattccatc
aaaacaggagatgtgcgggttttggcaaatgtgtcattcctacttgtcaaaaaagattgg
tcttctgaaatccggttgcatgctttcaaaatgctgcagcatttggttaggttgcgttgg
gaggaattaaacccagtggaacgaaggaattttgcaaatattgcttttgaattgatgtct
gagattgcaaattcttctgaagaatgggctctaaaaagtcagacagctgcccttgttgct
gagattgttagaagagaaggtgttgaactgtggcaagagctgcttccatctctggtttcc
ttatctggcaagggtcctgtgcaagctgagttggttgcaatgatgctgaggtggctccct
gaagatattacagttcacaatgaagatttagaaggtgaccggcgtaggcttttgttgcgg
ggccttactcaatccttgcctgacattttgcctttattttataatttattggaaagacac
tttggagctgcattgcatgaagttggtaggcaacaattggactctgcgaaacagcatgct
gccacagtaacagctactctgaatgctattaatgcatatgctgagtgggctcctttacct
gatctagctaaatttggtgtaattcatggttgtggctttttactttcttctaccgacttc
cggcttcatgcttgtgagtttttcagacttgtctctccaaggaagaggcctgttgatgca
tctgcttctgaatttgattctgcaatgagtaatatctttcagatcttgatgaacatttcc
agagaatttttattgaaatctgggtcaagtactggggttatagatgagagtgaatatgag
tttgcggaatatatatgtgaaagtatggtgtctttgggttcttccaacttgcaatgcatt
tccagtgatagcagtatactctctctttatctacaacagatgttgggctattttcaacat
tataagctagctcttcattatcaatccctgctcttttggctggtgctaatgagagatttg
atgtccaagccaaaagctaccatgctttcacccggtgatggttcttctactaataatgtg
ggctgtgcttctggacaggttgataatgagaaaacaaagattttaagtctgatgaatgat
gatatttgtagtgcaattcttgatatcactttccagcgcatgcttaaaagagaaaaaata
ggggcatccctctctcttggggctttggagttatggagtgatgattttgaagggaagggg
gattttagccagtatcgtttcaagctgtctgagctgatgaagtttgttgcttcttttaaa
ccccttatatccagtgctaaaatttctgaaagaattctttcaatcatcagtagcctctca
atctcagcaatctctgttcaggaattagcagtgatggaaagcacacaggtggctcttgaa
aatgttgtaagcgcaatttttgatggatcacatgaatattcgggtggaagatctgaagtt
caccttgcattatgtagaatatttgaaggtctacttcagcaacttctctcattgaaatgg
acagagccagctctcgtcgaagtcctcgggcactactttgatgctttgggtccctttatg
aaatatttcccagatgctgtgggcagtgttatcaataaactatttgagcttctgacatcg
cttccatttgttgttaaggatccttcaacaagtagtgcacggcatgcaaggctgcagatt
tgtacgtcattcattcgaatagccaaagctgctgacagaagtgttctgcctcacatgaag
ggtatagctgatacaatggcctatatgcaaagggaaggttgcctacatcgcagtgaacat
aatcttctaggcgaagcatttcttgtaatggcttctgctgctgggattcaacaacagcaa
gaagttttggcctggttacttgaaccgttgagccaacagtggatacagctagagtggcaa
aataattttttgtctgaacccctgggtctgatccgtttgtgctcagagacgccatttatg
tggtcaattttccacactgtaacattctttgagaaggcactcaaaagaagtggaactaga
aaaggcaatgttaatttacagaacagctcaacaggaagcacttctttgcatccaatgtct
tcacatctatcctggatgctgcctcctcttttaaaattgcttcgtgcaatacattccctt
tggtctccatccatatatcaagcattacctggtgaactgaaagctgccatgaccatgagt
gatgctgagcgatttgctcttcttggggaagggaaccccaaattgccaaagggttcttta
acttccgcagatggatcacaagttggcatgactaaggaaggatatgcagaagcaaatgaa
tctgatataagaaattggttaaaaggtatcagagatagcgggtacaacgtcctgggccta
tctatgaccgttggagatccatttttcaaatgtttggatgttgattatgttggcatagcg
ctaatggagaatatacagtccatggaattcagacatataaggcagcttgttcattcagtc
ttgatatatttggtcaagtcttgtccttcagaaacatgggaggtctggctggaaaagctc
ctatatccattatttctccatgtgcagcaagttcttcacttttcttggtctagtcttttg
catgaaggtaaagcaaaggctccagatgtccatggcatgcttgctgcatcagacttgaaa
gtggaagtaatggaggagaaactgcttcgagatcttactcgtgagacttgcttgcttctc
tcttcaatagcgtcaccaggactaaattctgggcttccttctttggagcaatctgggcaa
gtgagccgtgcagatatatcttctctgaaagacctggatgcatttgcatcaaactctatg
gttggtttccttctgaagcacaaaggcctggctcttccagcgttacagatttgcttagaa
gctttcacgtggacggatagtgaagcagtcacaaaagtttcttccttttgtgctcatgtt
gttcttctagcgatagcaacgaataatgttgaactccaagaatttgtttcaaaagatctg
ttctatgcaattatcaaaggcttggagctcgagtcgaatgcagttattagtgctgacctg
gttggtctttgtagagaaatattcatatacctccgtgatagagatccagccccaagacag
gttctactctctctcccttgtattacaacccaagacttgtatgcttttgaagaagcttta
acaaaaacctccagtcctaaggaacaaaagcagcacctgaagagcttgcttttattagct
actggaaacaagttaaaggcacttgctgcacagaaaagtgtaaatattatcacaaacgtt
acagctcgatctcgaacagcagttactgcttcagaaaccagaattgatgagggggattca
gtggggttggcagccattttgtga
DBGET
integrated database retrieval system
