Manihot esculenta (cassava): 110622252
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Entry
110622252 CDS
T05761
Name
(RefSeq) transcription initiation factor IIB-2
KO
K03124
transcription initiation factor TFIIB
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110622252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mesc03021
]
110622252
Transcription machinery [BR:
mesc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
110622252
Prokaryotic type
Archaeal type
TFB
110622252
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
DUF7573
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
110622252
NCBI-ProteinID:
XP_021622400
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All DBs
Position
9:3875951..3880639
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AA seq
312 aa
AA seq
DB search
MDAYCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVGG
PTNPLLTDGGLSTVIAKPNGASGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLGL
VATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATKK
EIGRAKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQEAVQKSEQFD
IRRSPISIAAAVIYIITQLSNEKKPSLKEISGATGVAEGTIRNSYKDLYPHVLKIIPSWF
AKEEDLKNLSSP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggacgcttactgctcggactgcaagcggcagacggaggtggtgttcgaccactcagca
ggggatacggtgtgctcggagtgtggattggtgttggaatcacattcgatcgatgagacc
tccgagtggaggactttcgctaatgagtctggagataatgatcccgtccgtgttggtgga
cctacgaatcctctcttaactgacggtggtctttccaccgtcatagccaagcctaacggt
gcttctggcgagttcctttcctcttccttgggtcgctggcagaatagaggatccaatccg
gatcggggtttgattttggcgtttaaaactatagctacaatgtctgataggttgggcctt
gttgcaactataaaggatcgggcaaatgagatctataaacgggtggaagatcaaaagtcc
agtagaggaagaaatcaggatgccttattggctgcttgcctctacattgcttgtcgacaa
gaagacaagccacgaactgttaaggaaatttgctctgtcgccaatggagccacaaagaaa
gaaattggccgagcaaaagaatatatagtgaaacagctggggttggagacgggtcagtca
gtggagatgggaacaatacatgctggggattttatgaggcgtttttgttccaatcttggt
atgaataatcaagcagttaaagctgcccaagaagcagttcagaagtcagaacagtttgac
ataaggaggagcccaatttcaattgcagcagcagtcatttatattataactcagctttca
aacgagaagaagcctagtctcaaagaaatttcaggtgccacaggagttgcagaaggaaca
attagaaattcctacaaggatctctatccccacgtgttgaagataatcccaagttggttt
gccaaagaagaggatctcaagaatctttccagtccttga
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