Manihot esculenta (cassava): 110622353
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Entry
110622353 CDS
T05761
Name
(RefSeq) cell division cycle 20.1, cofactor of APC complex
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110622353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mesc04121
]
110622353
03036 Chromosome and associated proteins [BR:
mesc03036
]
110622353
Ubiquitin system [BR:
mesc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
110622353
Chromosome and associated proteins [BR:
mesc03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
110622353
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR19_1st
WDR55
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
Ge1_WD40
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_RIG_1st
RMC1_N
WDR54
Kelch_1
CFAP43_N
Motif
Other DBs
NCBI-GeneID:
110622353
NCBI-ProteinID:
XP_021622529
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All DBs
Position
9:32610343..32613079
Genome browser
AA seq
455 aa
AA seq
DB search
MDAGSVNSSSNLKSQSRFPLQEQILQRKSSKENLDRFIPNRSAIDWDYAHYMLTEGKKGK
ENPLDCSPAREAYRKQLAETLNLNRTRILAFKNKPPAPVELIPQEHISSSQLQAKPTKPR
RHIPQSSERTLDAPDLVDDFYLNLLDWGSSNVLAIALGNSVYLWDASDGSTSELVTIDDE
IGPVTSVNWAPDGRHIAIGLNNSEVQLWDSAANRQLRTLKGGHRSRVGSLAWNNHILTTG
GMDGQIINNDVRIRSHIVETYRGHQQEVCGLKWSASGQQLASGGNDNLVHIWDRSLASSN
SATQWLHRLEDHTSAVKALAWCPFQGNLLATGGGGGDRCIKFWNTHTGACLNSLDTGSQV
CSLLWSKNERELLSSHGFTQNQLTLWKYPSMVKMAELTGHTSRVLFMAQSPDGCSVATAA
GDETLRFWNVFGIPEAAKPAPKANTEPFSHLTRIR
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaggatcagtaaactcctcttcgaacttgaaatcacaatccagattcccgctt
caagagcagattcttcagagaaagagttctaaagaaaacttggatagatttattccgaat
cggtcagcaatagattgggactatgcacattacatgctaactgaaggtaagaaaggtaaa
gagaaccctttagattgctcaccagcaagagaggcctacagaaagcaactggcagaaact
ttgaacctgaatcggactcgaattctagctttcaaaaacaagcctcctgctcctgttgaa
ttgatccctcaagagcacatttcctcatctcagcttcaggctaaaccaactaagccgcgc
agacacattccacagagttctgagaggacattggatgctccagaccttgttgatgatttc
tacctgaacttactggattggggcagcagcaatgttctagctatagctcttggaaacagt
gtgtatttgtgggatgcttctgatggttctacctcagaacttgtgacaattgatgatgaa
attggtcctgttaccagtgtcaattgggctcctgatggacgccacattgccattggcttg
aacaattctgaggtccagttgtgggattctgccgctaatagacagctaagaacgttgaaa
ggtgggcacagatcaagagttgggtcactggcatggaacaaccatatcctcactactgga
ggaatggatggccaaataattaataatgatgtgagaattagatcacacattgtggagacg
tatagaggacaccaacaagaggtttgtggacttaaatggtcagcttctggccaacaatta
gctagtggaggcaatgataacctcgttcacatatgggatagatccttggcatcatcaaat
tcagctactcaatggcttcacaggctagaggaccatacttctgcagtgaaagctctcgct
tggtgtccattccaaggaaatttgctggccactggaggaggtggtggtgataggtgcata
aagttttggaatacacacaccggtgcctgcttgaactcattggacactggctctcaagtc
tgttctctattgtggagcaagaatgagagagagctgcttagctctcatggatttactcaa
aatcaactcacactatggaaatatccatcaatggtgaaaatggcagaactcactggccac
acatctagagtccttttcatggctcagagtccagatggttgctcagtggcaacagcagca
ggcgatgaaacccttagattctggaatgtttttgggattccagaagcggctaagcctgct
ccaaaagcaaatacggagcctttttcccatttgactcgcatccggtga
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