Manihot esculenta (cassava): 110622355
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Entry
110622355 CDS
T05761
Name
(RefSeq) RING-H2 finger protein ATL74
KO
K19040
E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:
2.3.2.27
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mesc04121
]
110622355
Enzymes [BR:
mesc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110622355
Ubiquitin system [BR:
mesc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
110622355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-ANAPC11
zf-RING_5
Prok-RING_1
zf-RING_UBOX
zf-C3HC4_3
zf-RING_4
zf_RING_Vps8_fungal
FANCL_C
zf-RING-like
UBZ_FAAP20
Motif
Other DBs
NCBI-GeneID:
110622355
NCBI-ProteinID:
XP_021622533
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All DBs
Position
9:32027289..32029006
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AA seq
193 aa
AA seq
DB search
MMNMHRSLLEREPSVAPANGKTRQDSYISDTNFDTNTVIILAALLCSVIVALGLNSIVRC
ALRCCRRFAFETPEQAAARLAATGLKKRDLSQIPVAVYGKGVNNFPGTECPICLGEFADG
EKVRVLPKCNHGFHVRCIDTWLLSHSSCPNCRLSLLEHTAAGSGAGPQQQPPAARVSEND
NRRQGNVVIEGAS
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatatgcatcgcagtctgctcgaaagagagccaagcgtggcacccgccaatggg
aaaacaagacaagattcttacattagcgacaccaatttcgacacaaacaccgtgattata
ttggctgctttgttgtgttcggtgattgttgctctaggattgaactctattgttcgttgt
gctttgcgttgttgcagaaggtttgccttcgagacgccagagcaagccgcagctcgtttg
gccgccacagggctgaagaaacgggatttgagccagattccagtggcggtttatgggaaa
ggggtgaataattttccaggaactgagtgcccaatttgcttaggagagtttgctgatgga
gaaaaagttcgagtgctacctaaatgcaatcatgggttccatgtgaggtgcatagacaca
tggcttttgtcacactcctcttgccccaattgccggctttcgttgcttgaacacacggcg
gctggttcaggtgcaggtccacaacaacaaccacctgcagcaagggtgtcggagaatgat
aaccggcggcaaggaaatgtggttattgaaggggcaagttga
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