Manihot esculenta (cassava): 110622452
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Entry
110622452 CDS
T05761
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00040
Pentose and glucuronate interconversions
mesc01100
Metabolic pathways
Module
mesc_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110622452
Enzymes [BR:
mesc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
110622452
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
110622452
NCBI-ProteinID:
XP_021622643
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Position
9:complement(4836518..4839770)
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AA seq
453 aa
AA seq
DB search
MPLQGLHLYLFFFIIIIFFAIIPCYYCLQGDTLNHYLQEEDGYDSGAYPSYINSIEDGHF
KVKIFDDKVGSISTSVHKVNVDDFKPNFDNNHDDDTEAFEKAWEEACSSEEGAVIVVPEK
KYRLKPVRFSGPCKSNITVQIYGIIEASDDRSDYEEDERHWLVFDKVENLLVEGGGTIDG
NGNIWWQNSCKVDKDLPCKDAPTALTFYRCQNLVVDNLTIQNAQQMHISFQRSKDVQVSN
LNVTSPEHSPNTDGIHVTHTNNIQIANSSIGTGDDCISIVSGSQNVQAKNISCGPGHGIS
IGSLGSRHSKDYVSEVTIDGAEISGTTNGVRIKTWQGGSGIAKNIKFQNIEMHNVSNPII
INQYYCDHHKPCKEQKSAVKVKNVMYKNIKGTSATEVAIKFECSKAYPCQDILLQDVVLE
TEEAYQTAKALCNNVNLAELGLVLPQCPSLSSM
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgcctttgcaaggacttcacctttatctattcttcttcatcatcatcattttctttgcc
attattccttgctattattgtttacaaggagacacccttaatcattatcttcaagaagaa
gatgggtatgattctggagcttacccttcttatatcaactccattgaagatggccacttc
aaggtgaagatatttgatgataaagttggtagcatatcaacttcagttcataaagttaac
gttgatgatttcaaacctaactttgataacaatcatgatgatgatacagaagcatttgag
aaggcatgggaggaagcttgttcgtctgaagaaggagctgttattgttgtgcctgagaag
aagtatcgtttgaagccagttagattctcaggtccatgcaaatccaatattacagtgcag
atatatggaatcattgaagcatcagatgatagatcagactatgaagaagacgagagacac
tggctagtgtttgataaagttgagaatttgttagtcgaaggtggtggaaccattgatgga
aatggtaatatatggtggcaaaattcatgcaaagttgataaagatcttccttgcaaggac
gcccctacggctctcactttctacagatgccagaatttggttgtggacaaccttacaatc
caaaatgcacaacaaatgcatatttcttttcaaagaagcaaggatgttcaagtctccaat
cttaatgtaacttcacctgagcacagccccaacacagatggaattcatgtcactcatact
aataatatccaaattgcaaattcatctattggaacaggtgatgattgtatctctattgtg
agtgggtcccaaaatgtgcaagccaagaacatatcctgtgggccaggtcatggaataagt
attggcagcttagggtctcgccattcaaaagattatgtttcagaagtaactattgatggg
gctgagatttctgggactaccaatggtgtcaggatcaaaacatggcagggagggtcagga
atagccaagaacatcaagtttcaaaacattgaaatgcacaatgtgagcaaccccattata
ataaatcagtactattgtgatcatcataaaccatgtaaagaacagaaatcagcagttaaa
gtgaaaaatgtgatgtacaagaacataaaggggacaagtgctactgaagtggcaatcaaa
tttgaatgtagcaaagcttatccatgtcaagatattttattgcaagatgttgtcttggaa
actgaagaagcttatcaaacagcaaaagctttatgcaataatgttaatttagctgaattg
ggacttgttcttcctcaatgtccctcactaagttctatgtaa
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