Manihot esculenta (cassava): 110622473
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Entry
110622473 CDS
T05761
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 3
KO
K18999
RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:
3.1.3.16
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mesc01009
]
110622473
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mesc03021
]
110622473
Enzymes [BR:
mesc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
110622473
Protein phosphatases and associated proteins [BR:
mesc01009
]
HAD phosphatases
Fcp/Scp phosphatases
110622473
Transcription machinery [BR:
mesc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
110622473
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
BRCT
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
110622473
NCBI-ProteinID:
XP_021622665
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Position
9:37357986..37364928
Genome browser
AA seq
1258 aa
AA seq
DB search
MGKDDENLKAEDVEEGEISDTASVEEISEEDFKKQDVNVAQESKPKDGRIWTMRDLYKYQ
MGGRYVSGLYNLAWAQAVQNKPLNELFVEVEPDEKSKRSPPPSFVPSINSICNSSKEDEK
NKVDKVVIDDSGDEMDDKIVDVEKEEGELEEGEIDLDSEPGEKAAGEGKETMSNSDEMSV
DGLQIESKEMNLEEKIKSIQEALERVTVIEAQKSFSTTCSKLRNTLESLRNVVPEFNIPT
KDYLMQLALTAVRAVNSVFCSMNHKLREQNKDHFSSWLSLVNSYVPPLFSPEQVKEIEVM
VCSLDSPGVLMSSISGEKEKETLIHSEVNKDNDVSAKSSVHNLITANKFPLFAESYVNNK
PNISLEAPKTGVSAFKSRTVLAPLLDLHKDHDADSLPSPTREAPPPLPVQRLLTPKVVND
TEDSRMHPYETDALKAVSSYQQKFSHSSFAVNDRLPSPTPSEESGAADGDVDGEVSSSLT
VGRFRLANPPIFSQTIPSAGLPRTESSSMQGVIPPKSAGSAGSGPALTVKAPAKSRDPRL
RFVNSDANFSDQNQHALSMMNHALKMEPALGTRNLKKQKSVDDIIQDGPSLKKQRNTLEN
SGVIRDVKAMVGSGGWLEETDIVGPQTVNSNQLAENVESDSRRIDNGVACPSTVSGISSV
NVSRNEQLQVTGTGVVAGAETAAVMGSSATSLPDLLKNIAVNPTMLINILKMGQQQRLAI
EGQQKPVDPAKSTTHPTNTNSILGALPMVNIDPPQSTGILPRPAGTIQDEMVKIRMKPRD
PRRVLHNNTLQRNGSLGSEQFKTNMTSTSTNQGTKDCQNVQKQEVQVEMKPPIQSLVPPD
ISLPFTKSLKNIADIVSVSNASTTQSPASQNVASQPVRSIMLNSDKPTGIGSAPGVAPVG
PYSQNGWGDVEHLFEGYNDQQKAAIQRERARRIDEQKKMFAANKLCLVLDLDHTLLNSAK
FVEVDPVHDEILRKKEEQDREKPQRHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYT
MGNKLYATEMAKVLDPTGLLFNGRVISRGDDGDPFDGDERVPKSKDLEGVLGMESAVVII
DDSVRVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHDERPEDGTLACSLAVIER
IHQNFFTHLSLDEADVRNILASLQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGA
VCTNQIDEQVTHVVANSLGTDKVNWALSTGRYVVYPGWVEASALLYRRANEQDFAIKP
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagatgatgagaatttgaaggcagaggatgttgaagagggtgaaatttccgat
acagcgtcagtggaagagatcagcgaggaagattttaaaaagcaggatgttaatgttgca
caagaatcgaaacccaaagatggtaggatttggacgatgagagatctatacaagtatcag
atgggaggaagatacgtctccggcttgtataatcttgcttgggcacaggcagtacagaat
aagcctctaaatgagctgtttgttgaagttgaacccgatgagaaatccaagcgatcgccg
ccgccgtcgtttgttccgtctataaatagcatttgtaacagcagcaaagaagacgagaag
aataaagttgataaagttgtgattgatgatagcggcgatgagatggatgataagattgtg
gatgttgagaaagaggaaggtgaattggaggagggtgagattgatttggattcagaacca
ggtgagaaagctgctggggaaggtaaagaaacgatgtcgaatagtgatgaaatgagtgtt
gatggcttgcagattgagtccaaggagatgaatttggaggagaaaattaaatcaattcag
gaagctctggagagagtgactgtgattgaagcacaaaaatcatttagcacaacttgttca
aaattgcgcaacacattggagagcttgcggaatgtggttccagaatttaatattcccaca
aaagattatcttatgcaattggcattgactgctgttagagctgttaactcggtgttttgt
tccatgaaccataaattaagggaacaaaataaggaccacttttcaagttggctttccctt
gtaaatagctatgtcccacctcttttctcccctgagcaggtcaaagagattgaggtcatg
gtttgctctctagattctcctggtgttctgatgagttcaatatctggtgaaaaagagaaa
gagacactgattcatagcgaggtgaataaggacaatgatgtctcagctaaaagttcagtg
cataatttgattactgcaaataagtttccgttgtttgcggagtcttatgttaataataag
ccaaacatatcattagaagctccaaaaacaggagtgtctgcttttaagagtagaacagtt
ttggccccgttgttagacctccacaaggatcatgatgcagacagccttccatctccgaca
agggaagcaccaccaccattacctgtacaaagactattaacacctaaggtggtgaatgac
actgaagattctagaatgcatccatatgaaactgatgcacttaaagctgtttctagctac
cagcaaaaatttagccatagttcatttgcagtgaatgacaggcttccaagcccaacacct
tcggaggaatctggtgctgcagatggtgatgtagatggggaagtttctagttcattgact
gttggtcgatttagacttgctaatccgccaattttcagtcaaacaattccttctgctggt
cttcctcgcactgagagttctagtatgcagggagttatccctcctaaaagtgctggatca
gcaggttctggacctgctttaactgtgaaagcccctgcaaagagcagggaccctaggctt
cgatttgttaattctgatgccaatttttcagatcaaaaccagcatgccctgtcaatgatg
aatcatgcacttaaaatggaacctgctttaggaacaagaaacttaaaaaagcagaaatct
gtagatgatattattcaagatggtccttcattaaaaaagcaaaggaacacattggagaat
tctggagttataagggatgtgaaagccatggttggaagtggcggttggttggaggagact
gacatagttggacctcaaactgtgaatagcaatcagttggcagagaatgtggaatctgat
tccaggagaatagataatggagtagcttgtcctagtacagttagtggaatatctagtgta
aatgttagtagaaatgagcagttacaagttacgggaactggtgttgttgctggagctgaa
acggcagctgtgatgggtagtagtgcaacatctctgccagatctgttgaaaaatattgca
gtgaatccaacaatgttgataaatatactcaaaatgggacaacaacagagattagcaata
gaaggacagcagaagcctgttgatcctgctaaaagtacaacacatccaacaaacacaaat
tcaattctgggagctcttcctatggtgaacattgatcctccacaatccacggggattttg
ccaagaccagcagggacaattcaggatgagatggttaaaattcgaatgaaaccacgagat
cctcgccgtgttctccataataatacactccagaggaatgggagcttggggtctgaacag
ttcaaaacaaacatgacatctacatcaactaaccagggtactaaggactgtcagaatgtc
caaaagcaagaggtgcaagtggagatgaaaccgcctatacaatctcttgtcccaccagat
atttccttgccatttaccaagagtttgaaaaatattgctgatattgtgtctgtttccaat
gcatcaacaactcaatctcctgcttctcagaatgttgcatctcaacctgtgcgatctata
atgttaaattctgacaagccaactggaattggttcagcaccaggtgtagcaccagtaggt
ccctattcccagaacggatggggagatgttgagcatctctttgaaggatataatgaccag
caaaaagctgctatacagagagagagggcaagaaggatagatgaacaaaagaaaatgttt
gctgcaaacaagctctgccttgtgttggatctggatcatacacttcttaactctgccaag
tttgttgaagttgaccctgtgcatgatgagatattgcggaagaaggaagaacaagatcgt
gaaaaaccacaaagacatctattccgctttccacatatgggaatgtggacaaaattgcgc
cctgggatatggaatttcttggaaaaggctagtaaactgtatgagctgcatctttacaca
atggggaacaaattgtatgccacagaaatggccaaagttctagatccaacggggttgttg
ttcaatgggcgagttatttccaggggcgatgatggagatccttttgatggtgacgagagg
gttcccaagagtaaggatcttgagggggtcttgggtatggagtcagctgttgtcattatc
gatgattctgtgagagtctggccacataacaagttgaacttgattgttgtggaaaggtat
atttattttccttgtagtagacgtcaatttgggcttccaggtccttctcttcttgagatt
gaccatgatgagagaccagaagatggaactttggcatgctctttggcggttattgagaga
atacatcaaaacttttttactcacctctccttagatgaagcagatgttagaaatatcctt
gcatcattgcagaggaagattttggctggctgtcggatagtatttagcagggtctttcct
gttggtgaagccaacccccatctacatccgctgtggcagacagctgaacagtttggtgct
gtctgcacaaaccagatagatgaacaggttactcatgtagttgccaattcgcttggaaca
gataaggtgaattgggctttatccacgggacgatatgttgtctatcctgggtgggtggaa
gcttcagctttgctatatcggagagcaaatgagcaagattttgccattaaaccataa
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