Manihot esculenta (cassava): 110622610
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Entry
110622610 CDS
T05761
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 2
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mesc01009
]
110622610
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mesc03021
]
110622610
Enzymes [BR:
mesc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
110622610
Protein phosphatases and associated proteins [BR:
mesc01009
]
HAD phosphatases
Fcp/Scp phosphatases
110622610
Transcription machinery [BR:
mesc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
110622610
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
dsrm
Motif
Other DBs
NCBI-GeneID:
110622610
NCBI-ProteinID:
XP_021622867
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Position
9:complement(30464726..30479672)
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AA seq
841 aa
AA seq
DB search
MSRLGFKSVVYHGELCLGELDAIPATDKNFQFPNNEIRIHRISQSGRCPPLSILQTVSSY
SVRCKLESSSPHEQPHLINLHAACFHESKTAVVLVGDEEIHLVAMPSKLKKFPCFWCFPV
PLGLYDSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRTWIARETDPVRLSGMS
AELKRYVDDRMLLKQYTESDYVMDNGKMLKVQLEEVPLPSETHERLVRPVIRLQDRNIVL
TRINPEIRDTSVLVRLRPAWEDLRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPESH
LIAAKQLLYRVVCVKSGSRKSLSNVFQDGMCHPKMAMVIDDRSKVWEDKDQSRVHVVPAF
TPYYAPQAETANAVPVLCVARNVACNVRGCFFKEFDDNLIRRISEVFYEDEVINLPHAPD
VSNYMISEDAGFVPNGFSNAPINEGMSGVEVERRLNHLDEKNVINPASHFMTNSPELRSE
ISQSPVGIIPNVTGPMSPTTLIPSQKPSLLGAPRRDLRNQNSGQPPLLSRVPVPLSSSSV
PMPIPSSSIQPQCGWLVEEDINTAHVNTRPSGFALENDLPKPDKLRSLQNPFSHSPPVSA
SSGLVSHASQVKSEEAFAGHDMQKQSLPSGGHPSDVGVSSQNPVSSNFQPESVKLNLLPS
HLSIGVLQEIGRRCNSKVEFRSVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAHQQAAE
NALHSLAEKYVAYIAPHSGAVDHDFDKLSLGNENGFIWDIVNPGSSEVVPEDGTPKESTP
EDNEVEPSITSSNFVNQQQQKRANSPRLLQSVPSKRTKEELVRGSQSLQFSRHQKNGNHV
S
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtttagggtttaaatccgtggtctatcacggtgagctctgtttgggagaactg
gacgccattcccgcgacggacaagaatttccagttcccaaacaacgagatacggattcac
cgcatctcgcaaagcgggcgttgtccacctctttcaattctccaaaccgtttcctcgtat
tccgttcgctgtaagcttgaatcttcttctccgcatgagcagcctcatttgatcaacctt
cacgccgcttgcttccatgaatccaagacggctgtggttttggttggagatgaggagata
cacttagttgcaatgccgagtaagctgaagaagtttccgtgcttttggtgctttccagtt
cctttaggtctctacgattcgtgcttaggcatgcttaatttacgctgtctagctattgtg
tttgatcttgatgagactcttatagtcgcgaacactatgaagtcgtttgaggatagaatt
gaggctcttaggacttggattgcgcgtgagactgatccagtgaggctatctggaatgtct
gctgagctgaagcggtatgtggatgatcgaatgctattgaagcagtacactgagagcgat
tacgttatggataatggaaaaatgttaaaggtccaacttgaggaggttccactaccatct
gaaacgcatgagaggcttgttagacctgtgattagattgcaagataggaatattgtcctt
actcgtatcaatcctgagattcgtgatactagtgtacttgtgaggttgaggcctgcatgg
gaggatttgcgaagttatttaactgcaaaaggacgcaaaagatttgaagtttatgtttgt
acaatggctgagagggattatgccttagaaatgtggaggcttcttgacccagagtcacac
ctgatagctgctaagcaactgctgtaccgtgttgtttgtgttaaatcagggtccaggaaa
tctttgtcaaatgtcttccaagatggcatgtgccatccaaagatggccatggtaattgac
gatcggtcaaaggtttgggaagacaaggatcaatcaagagttcatgtagttcctgcattc
acaccgtactatgctcctcaggctgagacagcaaacgccgttccagtcctctgtgtggca
agaaatgttgcttgcaatgtcagaggttgttttttcaaagaatttgatgataatctaata
cgaagaatatctgaagtcttctatgaagatgaggtgataaatttacctcatgctcctgat
gtgagcaactacatgatatctgaggatgcgggttttgtgcccaatggttttagtaatgct
cccattaatgaaggcatgagtggtgttgaagttgagcggagattgaaccatttggatgag
aagaatgttattaacccagctagtcattttatgacaaatagtcctgagttgagatccgaa
atctcccagtcacctgttggaataattccaaatgtcactggaccaatgtctccaacaacc
ctcattccttcacagaaacctagtttgcttggagctcctagacgagatttaagaaatcaa
aattcaggtcagccaccactcctgtccagggtacctgtgccattgtcatcatcctcagta
cctatgccaataccatcatcctctatacagccacaatgtggctggcttgtggaagaagat
atcaacacagcacatgtaaatactcggccttcaggctttgctctggaaaatgatttgcca
aagcctgataaattgcgatcacttcagaatccattttctcatagcccaccagtgtctgct
tcctcaggtttagtctcacatgcatcgcaagtgaagagtgaagaggcatttgctggacat
gacatgcaaaaacaaagtcttccttctggaggtcatccatcagatgttggtgtttcttct
cagaatcctgtatcatctaattttcaacctgaatctgtgaaattaaatcttctaccatcc
cacttgtctattggagtgctgcaagaaattggaagaagatgcaactcaaaggttgagttc
agatctgttgtaagcaccagtaaggatttgcaattttctgttgaggttttgttcactggt
gaaaagataggtgttgggatgggtaaaaccaggaaggatgcacatcagcaggcagctgag
aatgcccttcacagcttggcagaaaaatatgttgcatatattgcacctcattctggagct
gttgaccatgattttgataagctgtcccttggaaatgagaatggatttatatgggacatt
gtgaatcctggatcaagtgaagtggtgccagaagatggaacaccgaaagaaagtactcct
gaggataatgaagttgagccttcaatcacttcgtctaattttgtcaatcagcaacaacaa
aagcgtgcaaactcccctagattgctgcagtctgttcctagtaaaagaacaaaggaggaa
ttagtgcgtggttcacaaagtcttcaattttctcggcatcagaagaatgggaatcatgtt
tcatga
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