KEGG   Manihot esculenta (cassava): 110622704
Entry
110622704         CDS       T05761                                 
Name
(RefSeq) RING finger and transmembrane domain-containing protein 2 isoform X1
  KO
K28516  E3 ubiquitin-protein ligase RNFT2
Organism
mesc  Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mesc04121]
    110622704
Ubiquitin system [BR:mesc04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    110622704
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4_3 zf-C3HC4 zf-C3HC4_2 zf-RING_UBOX zf-rbx1 zf-RING_5 zf-RING_6 Prok-RING_4 zf-C3HC4_4 zf-RING_16 zf-ANAPC11 Caps_synth_CapC DUF1451 zf-RING_10 FixS zf-Nse Sina_RING
Other DBs
NCBI-GeneID: 110622704
NCBI-ProteinID: XP_021622994
LinkDB
Position
9:complement(32409431..32416510)
AA seq 484 aa
MMVRVRVRASAQMEASGSNSDGYRGSSGGSSTSSGNSRRYGMLSASSIIQAPISALLEYS
GLLRTSRSTHQETDTLMNASGGVHDHRLDDSTAVAAGIAAAANNGEVAIRIIGAGEHEHD
RESSGLAVGQLGSQREVSVQQPMAGMESDVQGDSRNDRGSGEGPPQQPSGASGDGEVADG
SGTNGRDSSYQRYDIQQAARWIEQVLPFSLLLLVVFIRQHLQGFFVTIWIAVVMFKSNDI
LRKQTALKGERKIYVLIGISLAFTLHVVGVYWWYQNDDLLYPLIMLPPKTIPPFWHAIFI
IMLNDTLVRQAAMVFKCILLMYYKNSRGRNYRKQGQMLTLVEYLMLLYRALLPTPVWYRF
FLNKEYGSLFSSLMTGLYLTFKLTSVFEKVQSFFAALKALSRKEVHYGAYATSEQVNAAG
DLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTTLF
FQIF
NT seq 1455 nt   +upstreamnt  +downstreamnt
atgatggttagggttagggttagggcatctgcgcagatggaagcgtccggtagtaattct
gacgggtacagaggttcttcgggagggagtagtacaagtagtggtaattctaggaggtat
ggaatgctatcggcttcaagtatcattcaggcacccatttctgccttgttagaatattcg
ggtcttttacgaacctctaggtcaactcaccaagaaacggacactttgatgaacgcctct
ggtggggttcatgatcatcgacttgatgattctacagctgtagcagcaggaatagctgcg
gcagccaacaacggtgaggttgcaattaggataattggtgcaggagaacatgagcatgac
agggagagctctggattggcggttgggcagttgggttctcagcgtgaggtgtctgtgcag
cagccaatggctgggatggaatcggatgttcagggagattctagaaatgatcgtggttca
ggagaaggtcctcctcagcagccttccggtgcaagtggagatggggaagttgctgatggc
agtgggactaatggaagggattcgtcttaccagagatatgatattcagcaagctgccaga
tggattgagcaagtccttcctttttctttgcttctgttggttgttttcatccgccagcac
ctgcaaggtttctttgttacaatttggattgctgttgtcatgttcaagtcaaatgacatc
ctacgtaaacaaacagctctgaagggagagaggaaaatctatgtcttgattggcatctct
cttgcgttcacacttcatgtggttggtgtctactggtggtatcagaatgatgatctttta
tacccattgattatgctccctcccaaaactataccacccttttggcatgctattttcatc
ataatgttgaatgatactttggtccggcaagcagcaatggtgttcaaatgtatattgtta
atgtattacaagaacagtagaggccggaattatcgtaagcagggtcaaatgctaactctt
gttgaatatctgatgctgctataccgcgccttgttgcctacaccagtctggtaccgtttc
tttttgaataaagaatatggtagcctcttttcatctctgatgacagggctgtacttgact
ttcaagctgacatctgtcttcgagaaggtgcaatctttctttgctgctttgaaggcacta
tcacgtaaagaggtacattatggggcttatgcaacatctgagcaggtcaatgcagcagga
gacctgtgtgctatatgccaggagaagatgcatgctcccattttacttcgttgtaaacac
atcttttgtgaagattgtgtatcagaatggttcgagagggaaaggacgtgtcccttgtgc
agggccttggtcaaacctgcagatcttagatcgtttggcgatggttctactactttgttc
ttccagatattctag

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