KEGG   Manihot esculenta (cassava): 110622749
Entry
110622749         CDS       T05761                                 
Name
(RefSeq) WD repeat-containing protein 48 isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
mesc  Manihot esculenta (cassava)
Pathway
mesc03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    110622749
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mesc03400]
    110622749
DNA repair and recombination proteins [BR:mesc03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     110622749
SSDB
Motif
Pfam: WD40 WD40_Prp19 DUF3337 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_TEP1_2nd Beta-prop_EML EIF3I Beta-prop_EML_2 Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 NBCH_WD40 Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_TEP1_C Beta-prop_IFT122_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF12 Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_RIG_2nd RAWUL WD40_RFWD3 WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_WDR75_2nd WDR90_beta-prop_4th Beta-prop_Nup120_160 VWA_3_C
Other DBs
NCBI-GeneID: 110622749
NCBI-ProteinID: XP_021623055
LinkDB
Position
9:35349011..35359534
AA seq 756 aa
MHRVGSAGNNSNSVRPRKEKRLTYVLSDADDTKHCAGINCLAVSKSSVSEGSDYLFTGSR
DGTLKRWALAEDSATCSATFESHVDWVNDAVLVGDSTLVSCSSDTTLKTWSCLSDGMCTR
TLRQHSDYVTCLAAAEKNSNIVASGGLGGEVFIWDLEAAIAPVSKSNDAMEDDCSNGVNG
SVNPLPLTSLRTINSSNNITMHTTQSHGYVPIAAKGHKESVYALAMNESGTILVSGGTEK
VVRVWDPRTGSKTMKLRGHTDNIRALLLDSTGRFCLSGSSDSMIRLWDLGQQRCVHSYAV
HTDSVWALASTPTFGHVYSGGRDLSLYLTDLATRESLLLCSKDHPILQLALHDDSIWVAT
TDSSIHRWPAEGHNPQKVFQRGGSFLAGNLSFSRARVSLEGSTLVPVYKEPTLSIPGTPA
IVQHEILNNRRHVLTKDTAGSVKLWEITRGIVVEDYGKVSFEEKKEKLFEMVSIPGWFTV
DTRLGSLSVHLDTPQCFSAEMYSADLNIAGKPEDDKVNLARETLKGLLAHWLAKRRQRLG
SQASANGDITPRSLAHSRVEVDGSAENDSMVYPPFEFSTVSPPSIITEGSQGGPWRKKVT
DLDGTEDEKDFPWWCLDCVLNNRLPPRENTKCSFYLHPCEGSAVQILTQGKLSAPRILRI
HKVVNYVIEKMVLDKPMDNPDGTFAPGMGGGQLQHSAVGDGSYRPGLKPWQKLRPSIEIL
CNNQVLSPDMSLATVRAYIWKKPEDLVLNYRVVQGR
NT seq 2271 nt   +upstreamnt  +downstreamnt
atgcaccgcgtgggtagtgcaggaaacaattccaattctgttcgcccgcgcaaagagaag
aggcttacttatgttttgagtgatgctgatgacacaaagcattgtgctggcattaattgc
ttggctgtgtcaaagtcatctgtatctgaagggagtgattacctcttcactgggagtcgt
gatggcacactgaaaagatgggcgttggctgaagattccgctacgtgctctgctacattt
gagtcacatgttgattgggtaaatgatgctgtccttgttggtgatagcacacttgtctcc
tgctcttcagacaccaccctcaagacttggagttgcttgtctgatggaatgtgtaccagg
actcttcggcagcactcagattatgttacttgtcttgctgcagcagaaaaaaatagcaat
attgttgcctctggtggccttggtggggaggttttcatatgggatcttgaagctgcgatc
gctccagtctcaaaatcaaatgatgcaatggaagatgattgttcaaatggtgtcaatggt
tctgttaacccattgcccttgacaagtttacgtaccattaactcaagcaacaacataact
atgcatacaactcaatcccatggatatgtcccaattgctgccaaaggccacaaggagtca
gtttatgcattggcaatgaatgagagtggaactattcttgtctctggtggaactgagaag
gtggtacgtgtttgggatccaagaactggttcaaagactatgaagctaagagggcacact
gataatatcagggctctgcttttggattctactggcaggttttgcttatccggatcatct
gattctatgatcagactatgggacctcggtcagcagcgttgcgtgcattcatatgctgtg
catacagattctgtttgggcacttgccagcactccaacttttggccatgtttatagtggt
gggagggatctatctttatacttgacagacttggcaacaagagagagtcttttgctttgc
tcgaaggatcatcccattttgcaattggcattgcatgatgatagcatatgggttgcaaca
acagattcttcgattcatagatggcctgctgagggacacaatcctcaaaaggtctttcaa
agaggtggttcatttttagctggaaacctgtccttttcaagggcaagagtttctttagaa
ggatccaccctggttcctgtctataaagaaccaaccttaagcatacctggaactccagct
atagtgcagcatgaaattttaaataatagaaggcatgtcctgaccaaggatactgctggt
tcagtgaagctatgggagatcacgaggggcattgtagtggaggattatggaaaggtgtca
tttgaggagaaaaaggaaaaattatttgaaatggtaagcattcctgggtggttcactgta
gatacaaggcttggaagcttgtctgttcatttggacacaccacaatgcttttctgcagag
atgtattctgcagaccttaacatagctggaaaacctgaagatgataaggttaatctagct
cgtgaaacccttaaaggtctattggctcattggttggcgaaaagaaggcaaagacttgga
tcccaagcttcagctaatggggatattactcctagaagtctagcccattccagagttgag
gttgatggtagtgccgagaatgactcaatggtgtatcccccgtttgaattttcaacagtt
tctcctccttcaattatcactgaaggctctcaaggaggcccatggagaaagaaagttact
gatttagatggaactgaggatgaaaaggacttcccttggtggtgtttagattgcgtattg
aataatcgcctccctccaagagaaaataccaagtgcagcttttatttgcatccttgtgaa
ggctcagctgtccagatcctcacacaaggcaaactaagtgcaccccgcatactgagaata
cataaagtcgtcaattatgtcatagaaaagatggtccttgacaaaccaatggataatcct
gatggaacttttgctcctggaatgggtggaggacagttgcagcattctgcagttggtgat
ggatcttatcgacctggactgaagccttggcaaaagcttaggccgtccatagagattttg
tgcaacaatcaggtcctgtctccagacatgagcttagccacagtgagagcttacatatgg
aagaaacctgaggatctggtcctcaactatagagtggttcaaggaaggtga

DBGET integrated database retrieval system