Manihot esculenta (cassava): 110622780
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Entry
110622780 CDS
T05761
Name
(RefSeq) nuclear transcription factor Y subunit A-9 isoform X1
KO
K08064
nuclear transcription factor Y, alpha
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mesc03000
]
110622780
Transcription factors [BR:
mesc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
110622780
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CBFB_NFYA
Motif
Other DBs
NCBI-GeneID:
110622780
NCBI-ProteinID:
XP_021623103
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Position
9:complement(5335090..5344999)
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AA seq
309 aa
AA seq
DB search
MQMKLDNTSHPQLDPTNCMASSKAWWHGVRSNVVLSDMLEESTKNLLTSNYMDDGCGGKS
GKSRAANHQFGEGTDAYKEMQFTALPQSDGKYGEEHQQQHLQHSVSFMPPPMVEYLVPPT
QLEHVGPSLVHSCYLGAYPTRMVLPLEMTEEPVYVNAKQYHGILRRRQSRAKAELEKKLI
KVRKPYLHESRHLHAMRRARGCGGRFINTKKLDNSAAKTTLDKANNFIDTVLKPSTNSSS
AHSSKRSDSSAGNVVIEPDHLHKQISQRTYNGGDGTACSQYFLGFQLSSCHSQSDRMVEE
RDSNMKELW
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatgaaattggataacactagccatccacaattagatcccactaattgtatggct
tcgtctaaagcttggtggcatggtgttaggagcaatgttgttttatcagacatgttagag
gaaagtacgaaaaatttgttgacatcaaattacatggatgatggttgtgggggaaaatct
ggcaaatcacgagcagctaatcatcaatttggcgagggaactgatgcttataaagaaatg
cagttcactgcattgccacaatcagatggaaaatatggtgaagaacatcaacaacaacat
ctacaacattctgtatccttcatgcctccaccgatggtggagtatcttgtaccacctact
caactggaacatgttggcccttcacttgtccattcttgttatcttggagcctaccccact
agaatggtgttgccccttgaaatgacagaagaacctgtgtatgtaaatgccaagcagtat
catggtattctaaggcgaagacaatcgcgtgctaaagctgagctggaaaagaaactgatt
aaagttagaaagccttacctgcatgagtctcgacatttacatgccatgagaagggcaaga
ggttgtggaggccgctttataaacactaagaagcttgataacagtgctgctaaaaccacg
ttggataaggcgaacaactttattgacactgttctaaaaccttctacaaactcatcatca
gcacattcttctaagcgttccgattcatctgcaggtaatgttgtaatagaacctgaccat
ttacataaacaaatctcacaacggacctacaatggtggcgatggtactgcgtgctcccaa
tattttcttggatttcaattgtcatcatgtcactcacaatcagataggatggtagaagaa
agggatagcaacatgaaagaattatggtag
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