KEGG   Manihot esculenta (cassava): 110622788
Entry
110622788         CDS       T05761                                 
Name
(RefSeq) splicing factor U2af small subunit B
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
mesc  Manihot esculenta (cassava)
Pathway
mesc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110622788
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mesc03041]
    110622788
Spliceosome [BR:mesc03041]
 Complex A
  U2 snRNP components
   U2 related factors
    110622788
 Complex B
    110622788
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus PqqF-like_C_4 zf-CCCH_4
Other DBs
NCBI-GeneID: 110622788
NCBI-ProteinID: XP_043815394
LinkDB
Position
9:complement(9759244..9762200)
AA seq 313 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMLTP
GVDASAQSQSLDPRKIQDHFEDFYQDLFEELSKYGDIESLNICDNLADHMVGNVYVQFRE
EDHAANALNNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISR
ELRRRLFGRNRRRRSRSRSHSPSRHRGYDDRSHGGRGFGRRDDNRDHHHERGRRHRSRSP
GRRGGRSRSPAGRRNRSPPVRESSVERRAKIEQWNREREQTTSGNRDSQNPNNDKNSNGD
AWNGGLDDDPQHQ
NT seq 942 nt   +upstreamnt  +downstreamnt
atggcggagcacttggcttctatatttggaacagagaaggacagagtgaactgccctttc
tacttcaagatcggagcctgtaggcatggcgatcgctgctctaggctccacaccaagccc
agcatcagccctactcttctcctctccaacatgtaccagcgccccgatatgctcactccc
ggcgtcgatgcctccgcgcaatctcagtccctcgacccccgcaagatccaagatcacttt
gaagatttctatcaggatctttttgaggagctcagcaaatacggagatattgagagcttg
aatatctgtgataatctcgctgaccacatggtgggtaatgtctatgttcagttcagagaa
gaagaccacgcagcgaatgcgcttaacaatctcaatgggaggttttatgcagggcgccca
atcattgtcgacttctctcctgttacggatttccgtgaagctacatgtaggcagtatgag
gaaaatgtatgcaatcgaggtggctactgcaacttcatgcatctgaaaaagattagcagg
gagttaaggaggcgcttatttggaaggaataggagaagacgtagccgcagtagaagccat
agtcctagtaggcaccgtggttacgatgatcgctcgcatggtggccgcggttttggtaga
cgagatgataatagggatcatcaccatgagaggggcaggaggcatagaagccgaagtcct
ggacgcagaggaggacgcagccgaagtcctgcaggcaggaggaatagaagtcctcctgtt
agagagagcagtgttgaaagaagggctaagattgagcagtggaacagggagagagaacag
accacatctggtaatagagacagccaaaatccaaacaatgacaagaacagcaatggtgat
gcatggaatgggggtcttgacgatgatcctcagcaccagtag

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