Manihot esculenta (cassava): 110622807
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Entry
110622807 CDS
T05761
Name
(RefSeq) uncharacterized protein LOC110622807
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mesc04121
]
110622807
Enzymes [BR:
mesc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110622807
Ubiquitin system [BR:
mesc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110622807
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-ANAPC11
zf-rbx1
zf-RING_11
zf-RING_5
ZapB
zf-C3HC4_2
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
110622807
NCBI-ProteinID:
XP_021623162
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Position
1:41078964..41083701
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AA seq
575 aa
AA seq
DB search
MVINTNSFAKTICSICYEDLKPIVEDLQAISICGHVFHELCLQQWFEYCSNSRKCSCPVC
KQSCTGINVARLYFQSLGDQNEPFMSQKVIDCKEDPELLRGEVRRLEVKVSGLTSNLERQ
GKEIQKLNEELCICKDQVKKEVILRNDAMEQKTSTQQLLVSKSEELHSLKLECLRLQDRN
MALAKELAALKLVSDPNLDEDEILKLASFGNETNNKDTVDVLRKSLVIRNMSYKELMAKC
NQLGRGEARSSKKLEKAKEKIKKLKTKVKELEMMVEEKDNTALRALKASTKIDCEEDAVN
DINVNSDDFFTRPDFSEDQKEKLHKSVIKLDGTGNLNSDQGNFNIIKNAGASSTKERTTT
TGLIKEINTCFIIDEVLSDTDSRHQISEDMKSALPKSEAISNINSKAKVDGLANPGGFSG
TGPSINRDNGNTLAASTEEEVTLALDDVKHVQPMLKIKKEASTLVPVSSPGNICFSGGLL
APDGSNRYLGKWCKRGQSKGSLALQRPGTSASGSGDLIAVGSDGRGGRIKVLKSLNLSSL
ENSATAKRCKYGTKASISQSQGCLQIEHFFGKATH
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggtcattaacactaattcatttgccaagacaatctgttctatatgctatgaagatctc
aagcccattgtcgaagatctccaagctatctccatctgcggccatgtcttccacgaactc
tgcttgcagcaatggttcgagtactgctcgaactcaaggaagtgtagttgtcccgtgtgc
aagcagagctgcacaggaatcaatgtcgctcggctgtatttccaatcattgggggatcaa
aacgaaccttttatgtcccagaaagtgatcgattgcaaggaggatcctgagctgttgcgc
ggagaagtgaggagattggaggtgaaggtgtcgggtctcacttcaaatttggagcgtcaa
gggaaggaaatccaaaagctcaatgaggagttgtgcatctgcaaggaccaggtgaagaaa
gaagtcatactgaggaacgatgccatggaacaaaagacttcgactcagcaactgcttgtt
tcaaaatctgaggagcttcattctctgaagttggagtgcttacggctgcaagacaggaat
atggccttggccaaagagcttgctgctcttaagctggtatcagatccgaacctagacgaa
gatgaaattttaaagcttgcatcatttggtaatgaaaccaacaacaaagatactgtagat
gttctaaggaagtccttggttattcgtaatatgagttataaagaattgatggccaagtgc
aatcaacttggaaggggagaggcgcgatcctctaaaaagctggagaaggcaaaagaaaag
ataaaaaaacttaagacgaaggtcaaagaactcgagatgatggttgaagaaaaggataat
acagctttgagggctttaaaagcctcaacgaagatcgattgtgaagaggatgccgtaaat
gatattaatgtcaattcagacgattttttcaccagacctgatttctcagaagatcaaaag
gaaaaacttcataaatctgtgattaaattggatggaactggcaatttgaacagtgatcaa
ggcaatttcaatatcattaagaacgcgggtgccagttctaccaaagaacggacaaccacc
acaggtcttattaaggagataaatacttgctttataatagatgaggtactttcagatacc
gattcaagacatcaaatcagtgaagatatgaagtctgctcttcccaagtcagaagcaatc
tctaacatcaacagcaaagctaaagtggatggactagctaacccaggtggtttttcgggt
acaggtccttccatcaatagggataatggcaacactttggctgcttctactgaagaggaa
gttaccttggctcttgatgatgtcaaacatgttcaacctatgctcaagattaaaaaagaa
gcctcaaccctagttccagtttccagccctgggaatatatgtttttctggtgggctgctg
gctcccgatggatcaaatcggtatctggggaaatggtgcaagcgtggtcaaagtaaggga
tcgttggccttgcaaaggccaggtacaagcgcaagtggtagtggggatttaattgcagtt
ggatctgatggaagaggtggtagaattaaagttctgaagtccctgaatttgtcctcattg
gaaaattctgcaactgcaaagagatgcaagtatggaactaaagcaagtatttcgcagtct
caaggttgtttgcaaatagaacacttctttggtaaggccactcattag
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