Manihot esculenta (cassava): 110622874
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Entry
110622874 CDS
T05761
Name
(RefSeq) dystrophia myotonica WD repeat-containing protein-like isoform X1
KO
K24741
WD repeat-containing protein 20
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mesc04990
]
110622874
Domain-containing proteins not elsewhere classified [BR:
mesc04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
110622874
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40
WD40_Prp19
WDR55
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_Nup120_160
ANAPC4_WD40
EIF3I
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_EML
Pep3_Vps18
Motif
Other DBs
NCBI-GeneID:
110622874
NCBI-ProteinID:
XP_043816180
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Position
9:complement(11438346..11445433)
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AA seq
547 aa
AA seq
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MINTTNGMLSTSSASGNSQSPGLKTYFKTPEGRYKLHYEKTHPSGLLHYAHGKTVTQVTL
ANLKDKPALSTPTAAPSSFSASSGVRSAAARLLGASNGSRALSIVGGNGGSKTVSSSSGS
RIGSLGSSSNSMINPNFDGKGTYLVFNVGDTIFISDLNSQDKDPIKSIHFSNSNPVCHAF
DQEAKDGHDLLIGLSSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNSSRCTSIAWVPG
GDGAFVVSHVDGNLYVYEKSKDGAGDSSFPIIKDLTQFSVAHARYSKCNPIARWHICQGS
INSITFSTDGACLATVGRDGYLRVFDYSREQLVCGGKSYYGALLCCAWSMDGKYILTGGE
DDLVQVWSMEDRKVVAWGEGHNSWVSGVTFDSYWSSPTSDGTGETVMYRFGSVGQDTQLL
LWDLEMDEIVVPLRRCPPGGSPTFSTGSQSSHWESAVPLGTLQPAPSMRDVPKLSPVVAH
RVHTEPLSGLMFTQESVLTVCREGQIKVWMRPGATETQSSNSESILSSSLKDKPSFSIKV
GSSSHKQ
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgatcaatacgactaacggcatgctttcgacctcatcggcatcggggaactcgcagtca
ccaggcctaaagacctatttcaaaactccggagggtcgttataagctccactacgagaag
acacacccttcaggtctgcttcattatgcccatggcaaaaccgtcactcaggtaactctt
gctaatcttaaggacaagccggccctatcaaccccaacagccgcaccttcaagcttcagt
gctagtagtggggtaagatctgctgcagccaggttgttgggggctagcaatggaagccgt
gcactaagcattgttggagggaatggtgggagtaaaactgttagtagtagtagtggtagt
aggattgggtcattgggttcttcaagtaattcaatgatcaatccaaattttgatggaaaa
gggacttacttggtcttcaatgtgggggacacgatctttataagtgatttaaactctcaa
gataaggatccaataaaatcgatacattttagtaattcaaaccctgtttgccatgccttt
gatcaagaagctaaggatggacatgatttgcttattggattgagttctggtgatgtctac
tcagtgtcactgagacagcaattacaggatgttggaaagaagcttgttggggcccatcat
tataacaaagatggttctgttaatagcagccgttgtacaagtattgcatgggtgcctgga
ggtgatggtgcttttgttgtttctcatgttgatgggaatttgtacgtgtatgagaagagc
aaggatggtgcaggtgactcttcattccccattatcaaagatctaactcaattttcggtt
gcacacgcgcgttatagtaagtgtaaccctattgccagatggcatatttgccagggttca
attaatagcatcacattctcaacagatggtgcatgcttagcaactgttggaagagatggt
tacttgcgagtttttgactattctagagaacagctggtatgtggtgggaaaagttattat
ggtgctctactatgttgtgcttggagcatggatggaaaatacattttgactggaggcgaa
gatgatctagtccaagtttggagtatggaagaccggaaggtcgtggcatggggtgagggg
cacaactcatgggtaagtggagtgacttttgattcatattggtcatcaccaacttcagat
ggcacaggagagactgtaatgtaccggtttggatctgttggtcaggatacgcaattgttg
ttgtgggacttggaaatggatgagatcgttgtgccattacgtcgatgtcctcctggtggt
tctcccactttcagtacaggaagtcagtcgtcacattgggagagtgctgtcccacttggc
accttgcaacctgctcctagcatgcgagacgtaccaaagctttccccggtagttgctcat
cgtgttcacacagaaccactctctggcctgatgtttactcaagaatctgttcttactgtt
tgccgagagggccaaataaaagtctggatgagacctggggctaccgaaacccagtcaagt
aattccgagtccattttaagtagcagtttgaaggacaagccttcattctcaatcaaggtt
ggcagttctagtcataagcaatga
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