Manihot esculenta (cassava): 110622948
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Entry
110622948 CDS
T05761
Name
(RefSeq) ABC transporter B family member 19 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
110622948
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mesc02000
]
110622948
04147 Exosome [BR:
mesc04147
]
110622948
04090 CD molecules [BR:
mesc04090
]
110622948
Enzymes [BR:
mesc01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
110622948
Transporters [BR:
mesc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
110622948
Exosome [BR:
mesc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
110622948
CD molecules [BR:
mesc04090
]
Proteins
110622948
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
Zeta_toxin
AAA_22
AAA_29
nSTAND1
AAA_15
RsgA_GTPase
DUF87
Glyco_transf_22
Motif
Other DBs
NCBI-GeneID:
110622948
NCBI-ProteinID:
XP_021623402
LinkDB
All DBs
Position
17:complement(15065229..15073194)
Genome browser
AA seq
1257 aa
AA seq
DB search
MAAESVDTTNNTNTKGSLPEAEKKKEQSLPFYQLFSFADKYDWLLMISGSIGAIIHGSSM
PVFFLLFGEMVNGFGKNQSDLEKMTHEVSKYALYFVYLGLVVCLSSYAEISCWMYTGERQ
VGTLRKKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLA
GLVVGFVSAWRLALLSVAVIPGIAFAGGLYAYTLTGLTSKSRESYAQAGIIAEQAIAQVR
TVYSYVGESKALNSYSDAIQNTLKLGYKAGMAKGLGLGCTYGIACMSWALVFWYAGVFIR
NGQTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEIIRQKPTIIQDPSDG
KCLPEVNGNIEFKDVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIER
FYDPNQGQVLLDNVDIKTLQLRWLRDQIGLVNQEPALFATTILENILYGKPDATMDEVEA
AASAANAHSFITLLPNGYNTQVGERGVQLSGGQKQRIAIARAMLKNPKILLLDEATSALD
AGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDTIAVIQQGQVVETGTHEELISKGGAY
ASLIRFQEMVRTRDFANPSTRRSRSTRLSHSLSTKSLSLRSGSLRNLSYSYSTGADGRIE
MISNAETDRKNPAPDGYFCRLLKLNAPEWPYSIMGAIGSVLSGFIGPTFAIVMSNMIEVF
YYRNPASMERKTKEYVFIYIGAGLYAVVAYLIQHYFFSIMGENLTTRVRRMMLAAILRNE
VGWFDEEEHNSSLVAARLATDAADVKSAIAERISVILQNMTSLLTSFIVAFIVEWRVSLL
ILATFPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQDKISSLF
SYELRVPQLRSLRRSQTSGLLFGLSQLALYASEALILWYGAHLVSKGSSTFSKVIKVFVV
LVITANSVAETVSLAPEIIRGGEAVGSVFSILDRSTRIDADDPEADSVESIHGEIELRHV
DFAYPSRPDVPVFKDLNLRIRAGQSQALVGASGCGKSSVIALIERFYDPTAGKVMIDGKD
IRRLNLKSLRLKIGLVQQEPALFAASIFDNIAYGKEGATEAEVIEAARAANVHGFVSALP
DGYKTPVGERGVQLSGGQKQRIAIARAVLKDPAILLLDEATSALDAESECVLQEALERLM
RGRTTVLVAHRLSTIRGVDSIGVVQDGRIVEQGSHSELVSRPDGAYSRLLQLQHHHI
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagagagtgtagatactacaaataatactaatactaaaggatcattgccagag
gcagagaagaagaaagaacagagcttgccattttaccagcttttctcatttgctgataag
tatgattggctgctaatgatctctggtagcataggagccattattcatggctcatcaatg
ccagtatttttcttgttatttggtgaaatggttaatgggtttggcaagaatcaatctgat
ttggaaaaaatgacccatgaagtctccaagtatgcgctatattttgtctatcttggcctt
gttgtgtgtctatcatcatatgcagagatttcttgctggatgtacaccggagagagacaa
gtcggcacactgaggaagaagtatctagaggcagtgttgaaacaagatgttggattcttt
gacacagatgcaagaactggagatattgtttttagtgtctcaacagacactcttcttgtc
caagatgccattagcgagaaggtgggaaactttatacactatctatcaacatttctagct
gggctagtggttggttttgtatcagcatggaggctagcattgctaagtgtagcagtgata
ccaggaatagcttttgctggtggcttgtatgcatatacactcactggcctcacatccaag
agccgcgaatcctatgcacaagccggcataattgccgagcaggctattgcgcaagttcgg
acagtttattcttatgttggggagagcaaagccttaaattcgtattcagatgcaatacaa
aatactttaaagcttggatacaaggctgggatggccaaaggtttgggtttagggtgtact
tatggaatagcatgcatgtcatgggcccttgttttctggtatgctggtgtttttatcaga
aacggacagactgatggaggaaaggcattcacggcgattttctccgccattgttggtggc
atgagtttgggccagtcattttcaaatcttggggcatttagcaaaggtaaagctgctgga
tacaagttgatggaaattattaggcaaaagcctaccattattcaagacccctcggatggg
aagtgcttaccagaggttaatgggaacattgaattcaaggatgtaactttcagttaccca
tcaaggccagacgttataatattccgcgatttctcaatcttctttcctgctggaaagact
gttgctgttgttggtggtagtggatcagggaaaagtactgttgtctctctgatagagagg
ttttacgatcctaatcagggacaagttttgcttgataatgtggacataaagaccctgcaa
ctgaggtggttacgcgatcagattgggttggtgaatcaagaacctgcgctctttgcgacc
accatacttgagaacatactatatggaaagcctgatgccacaatggatgaagtggaagct
gctgcttctgctgcaaatgctcatagcttcattactttgcttcctaatggctacaatact
caggttggagagcgaggagtccaactctctggcggccaaaaacagagaattgcaattgct
agagctatgctgaagaatccaaagatccttcttttggatgaagctaccagtgcccttgat
gcaggctctgaaagcatagttcaagaagcattagaccgtctcatggttggaagaacaact
gtagtggttgcgcatcgactctccactattagaaatgttgatacaattgcagttatccaa
caagggcaagttgttgagacaggaacccatgaagaactgatttccaaagggggagcatat
gcttcattaatcagattccaagaaatggtgagaacgagagatttcgcaaacccatcaact
cgacgatcacgctcaacacgtctaagtcattcactttcaacaaaatctttaagcctccgg
tctggaagtttacggaacttgagctattcatatagtacaggtgctgatggtcgtattgag
atgatctccaatgctgaaactgaccgtaaaaatccagcaccagatggctatttctgcaga
ctactcaaactaaatgctcctgaatggccatattctataatgggtgctataggatctgtg
ctttccgggtttattggtccaacctttgccatagtaatgagcaacatgattgaggttttc
tattacagaaatcctgcctccatggaaagaaagacaaaggagtatgttttcatttacatt
ggtgctggtctttatgctgttgttgcatatttgattcagcattacttcttcagtataatg
ggagagaatcttactacaagagtaagaagaatgatgcttgcagcaattctgaggaatgaa
gttggatggtttgatgaagaagagcacaactcgagccttgtcgcagcacgattagctact
gatgctgctgatgttaaatctgcaatagccgagagaatatcagtgatactacaaaacatg
acctctctcctcacgtcattcatagttgctttcatagtggaatggagagtctcccttctc
attttagctacctttcctcttcttgtccttgccaactttgcacagcaactttctctcaaa
gggtttgctggagacaccgccaaggcccatgcaaagactagcatgattgctggtgaggga
gtgagcaacatcagaacagttgctgcttttaatgctcaagataaaatctcctctctgttt
agctacgagcttcgtgttccacagcttcgcagcctacgtaggagccaaacatcaggcctc
ctatttggcctctctcagcttgctctctatgcctctgaagctctcatcctttggtatggt
gctcatcttgtcagcaaagggtcctccacattctctaaggttattaaggtttttgtagtc
ctggtgatcacagctaattcagttgcagaaactgttagccttgctccagagattataagg
ggtggtgaagctgttgggtctgtgttttcaatcttggaccgttccacaaggattgatgca
gatgatcctgaggctgattctgttgaatcaatccatggggaaattgaacttaggcatgtt
gattttgcatacccctcacgacctgatgttccagtgttcaaagaccttaaccttagaatc
cgtgctggccaaagccaggcccttgtgggagctagtggatgtggaaagagttctgtgatt
gcattgatcgagcgattttatgatcctactgctggaaaagttatgattgatgggaaggat
attcgacgattgaatttgaagtcactgaggcttaagattgggttggtgcaacaagagcca
gctctctttgcagcaagcattttcgataacattgcctatggaaaagaaggcgcaaccgag
gctgaagttattgaagcagctcgtgcagccaatgtgcatggtttcgttagtgcattgcct
gatgggtacaaaacaccagttggtgaaaggggagttcagctctccggaggacaaaaacaa
agaatcgcaatagcaagagctgttcttaaggaccctgcaatacttttactagacgaggct
acgagtgcacttgatgctgaatccgaatgtgtgctacaagaagcacttgaaaggttgatg
agaggtcgaaccacggttcttgtagcgcaccgtttatcaaccatcagaggtgtggatagt
atcggagtcgtgcaagacgggaggattgtggagcaaggcagccactcggaactggttagc
cgccctgacggggcctattctagactcttgcagctacagcaccatcacatatga
DBGET
integrated database retrieval system
