Manihot esculenta (cassava): 110622972
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Entry
110622972 CDS
T05761
Name
(RefSeq) testis-expressed protein 10 homolog isoform X1
KO
K14827
pre-rRNA-processing protein IPI1
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
110622972
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mesc03009
]
110622972
Ribosome biogenesis [BR:
mesc03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
110622972
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ipi1_N
TOR1L1_N
BP28CT
Cnd1
CEP104-like_TOG
HEAT_2
Motif
Other DBs
NCBI-GeneID:
110622972
NCBI-ProteinID:
XP_021623438
LinkDB
All DBs
Position
9:complement(7893170..7905278)
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AA seq
875 aa
AA seq
DB search
MAKNKASSKKQQKRGVDFKKIKRKLGRKLPPPKKATNTEIKSKAIILPEQSVASEKTGLA
VSKKGLTLKELLQQTSHHNAKVRKDALMGMKDLFLKHPEELKLHRYAVIEKLRERVSDED
KVVRETLYQLLKSLILPGCNEDNQGPFISLIMAYIFNAMTHLAIEVRLMAFKFFDLIVQH
FSSSFSLYAEKVLQNYADILRKNQFYLEDKSKLKNVLAGLVRCLSLLPSRLEVDSCKKKV
HGREMLHAFELDKPTEVADFSVVINKLEDLVPVLVNCFQDFVPLIHSTQQLDALSFDCLH
NILQSIDLVVRFFVYGAEKDNPESHPSMWDQSISSVLLKKFVGVFPFNPVHHLSEKDDDR
YFTLNVMIAEIFFHLSEWICHPAELLEKFLAFLEYALLEKIRSEVRSGRAIREKQIVALV
HFVPKLVTQVIDNWKSRLLQAFTKTFLNCNPESSVKLACISAVEEMLFSRGMLYTDASDS
ELLDHLITWMRELPMLLILLGDRHSASSQAVLHLLLRLGQCCTVSSLLAFEYDNLQYSLQ
EFYGICREAGKKCYGPFIKLPMDCQELSICCLYYFRHLDPLMLKTIASCCLCPDLDASLL
FRIIEVLHLAFKAGHIQITDHLSFFVTLVSRFNVLPGDAHPDIEEDMKISNHQTFKSLIR
VVSSCLAQMGDNVLLLAILEKVILEQILLRPPLDNACAMLRFLVMLDSKPTRLSEESILS
LSNFLLGYLVDVVHRIPGDDDVPMCSSHVPRQSCYILPCFFLFDRSHDLLKLVLIVMASS
ISTSSSLSSNYHTHHASGHASRINDIVNVLKLMHKDAKIKQIICSSRAEINLIWRNIHSL
QSLEESNLGIRERHIIQCALDELKAIRSSEQMQIA
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaataaggcttcctcaaagaagcagcaaaagcgtggtgtggacttcaagaaa
attaagcggaagcttggcaggaaattgccaccccctaagaaagctacaaacactgaaatt
aaatccaaagcaattattctccctgagcaaagtgtggcttcggagaaaacgggtttagct
gtgagcaagaaaggcttgactttgaaagagcttcttcaacaaacttcccatcacaatgca
aaagttcgtaaagatgcattgatgggtatgaaggatttattccttaagcatccggaagaa
ctgaaattgcacagatatgcagttatagaaaaactacgtgaacgagtcagtgatgaagat
aaagtggttcgtgaaaccctttatcaacttcttaaatcattaattttacctggctgcaat
gaggataatcaagggcctttcatttctttaattatggcctacatttttaatgcaatgacg
catttagcaattgaagttcggcttatggctttcaagttctttgatctcattgtacaacat
ttttcttcttcattttccttgtacgctgaaaaggttcttcaaaattatgctgatattctg
cggaagaaccagttctatttagaagacaagagcaagctcaagaatgtgcttgctggtttg
gtgcgctgtttgtctctattgccgtctagactagaagttgactcatgcaagaagaaagtc
catgggcgagaaatgttgcatgcttttgagctggacaagcctacagaagttgctgatttt
tctgttgtcatcaacaaactagaggatcttgttccagttttagtcaattgcttccaagac
tttgttccattaattcacagcacacaacaattggatgctctgtcatttgattgcttgcat
aatatacttcagagcattgaccttgtagtcaggttttttgtttatggtgctgaaaaggat
aatccagaatcacatccttctatgtgggatcaaagcatctcttcagtgctcctaaagaag
ttcgtaggtgtatttcctttcaatccagtgcatcacctttcagaaaaggatgatgaccga
tattttaccttgaatgttatgattgctgaaatattttttcacttgagtgaatggatctgc
catcctgccgagttactggagaaattccttgcatttttggagtatgcactgcttgagaag
atccgcagtgaagtaaggtctggcagagcaattagagaaaagcagattgttgctctggtt
cattttgtcccaaaacttgtaacacaagtaatagacaattggaagtcccgccttctacag
gcatttacaaagacattcctcaattgcaatccggagtcttcagtaaagttggcctgcatt
tctgcagtggaagaaatgcttttttctagaggaatgttgtacacagatgcaagtgattcg
gaactgttggatcatctgattacttggatgagagagctgcctatgttgttaatcctgcta
ggggatcggcattcagcatcttcccaggctgtgttgcatcttttgcttcgtctgggtcaa
tgttgtacagtgagctctttgcttgcatttgaatatgacaacttgcaatactcactgcaa
gaattttatggcatatgtcgagaagcagggaagaaatgttacggtcctttcataaagctt
cctatggattgtcaagaactctccatatgttgtctttattattttcgtcatttggatcca
cttatgctgaaaacgatagcttcttgctgcctctgtcctgatttggatgcatctctcttg
tttcggatcatagaggttttgcatttggcctttaaagcaggccacattcagattactgac
caccttagcttctttgttactctggtctcccgtttcaatgtcttaccaggagatgctcat
cctgatattgaggaagatatgaagatctcaaatcatcaaactttcaagtcattgatccgt
gttgttagctcatgcctggcacagatgggtgataatgttctacttcttgcgatactggag
aaagtaatactagagcagatcttattaaggccgccgctggacaatgcctgtgctatgctc
aggtttcttgtaatgctagactccaaacccactagactttctgaagaaagtatcctcagt
ttgagcaatttccttttaggttatttggttgatgtagtacatcgtattccaggagatgat
gatgtgcccatgtgctctagtcatgtaccaagacagagttgctatattttgccttgcttt
ttcttatttgatagaagtcacgatctcttgaaacttgtattgattgtgatggcttcatca
atatctacaagcagttcactctcttcaaattatcatacccatcatgcttcaggacatgca
agtaggataaatgatatagtgaatgtcctaaaactgatgcataaagacgccaagattaag
caaattatttgttcatcaagagctgagattaatcttatttggcgaaacatacactctcta
cagtcactggaggaaagcaatctgggtattagagaaaggcatataatacaatgtgcattg
gatgaactaaaggctattagaagttctgaacagatgcaaattgcttaa
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