Manihot esculenta (cassava): 110622978
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Entry
110622978 CDS
T05761
Name
(RefSeq) CDK5RAP3-like protein
KO
K28116
CDK5 regulatory subunit-associated protein 3
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mesc04131
]
110622978
Membrane trafficking [BR:
mesc04131
]
Autophagy
ER-phagy
ER-phagy recepters
110622978
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CDK5RAP3
KH_KRR1_1st
WSD
DUF2860
Noelin-1
REST_helical
Motif
Other DBs
NCBI-GeneID:
110622978
NCBI-ProteinID:
XP_021623452
LinkDB
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Position
9:6542357..6549342
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AA seq
570 aa
AA seq
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MQTPEDIRNLPIDITFSRLGEWLVDRKRIPADWRKRISAVRARISKEFASLPKDIDTYFQ
TLDPEGIGYLEAKKIYDILVKTTPESRNIFGRLSGAAGAWEAIVRSFEKDYIYLGEAAQV
IIQNVNYEIPYQKKQVQKIQQQLAELERKEADIKRSASLSAAKYIEACQELGLQGNNVRS
ELLDTAKLLPSTFSRILEVINSDSMLRTIEYYSTFIRDVHTEKDKSAQAVLLNLKKIHEY
PPSLNVSAVPEILDSENIGLSFDESSNVRRNGDFTADNIDWDISVDSSQIDWDIGAVEET
DDGGNGLGPYEIVNASDIIENSSQNEAIGSDQTPLNKREGNLHPEISVSEISWDISVETP
RVDVIDDVNLPNISLENQTHVADPPSQNPGVKEGRSQLLETEYRNNLLDDLYEIKAFLSQ
RLAELRNGDTLSLQHQVQSVAPLVLQQYTPDAIETLLSDVSLAISLLTNRKTRDLIMILN
SKRFLDRLVGTLEEKKHHEQKLKEGLKDLAAKRMELQNSLSSSWPKQEAALAKTRELKRL
CESTLSSMFDRRPVNLIGEINTLLNSGISA
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgcagactccagaggacattcgaaatctccctatcgacatcacattctcccgacttgga
gaatggctggttgatcggaagagaattccggccgattggagaaaacggatttccgctgtt
agagctcgaatttccaaggagttcgcttctctgcctaaggatatcgatacctatttccaa
acccttgaccctgaagggattgggtacttggaggccaagaaaatttatgatattcttgtg
aaaacaacgccagagagccggaacatatttggccggctatcaggtgctgctggtgcttgg
gaggcaattgtgcgctcttttgagaaagactatatctacctaggtgaggctgcccaagta
ataattcagaatgtaaattatgaaataccatatcagaaaaagcaggtgcagaagatccag
caacaattagcagaactagagcggaaggaggctgacataaaaagaagtgcatctctttca
gcagctaaatatattgaggcttgtcaagagcttggattgcagggaaacaatgtcaggtct
gaactcttagatactgcaaaattgcttccaagcacatttagcaggattctagaagttata
aatagtgattcgatgctgcgcacaatagaatattattccacttttatcagagatgttcac
acagaaaaggataaatccgcacaggcagtattgttgaacttgaaaaaaattcatgaatat
cccccttctctaaatgtttctgctgttccagagatccttgattctgaaaatattggattg
agttttgatgaatcgagcaatgtgagacggaatggggattttactgcagataatattgac
tgggatatttctgttgatagctctcagattgattgggatattggtgctgtggaagaaaca
gatgatggtggtaatggtttgggtccttacgaaattgtgaatgctagtgacatcatagag
aattcatcacaaaatgaagctataggatctgatcaaaccccattaaataaaagggaaggc
aacttgcatccagagatttctgtatcagaaatatcttgggatatcagtgttgaaacacct
cgggtggatgtgattgatgatgtcaatttgcccaatatcagcctagaaaatcagacacat
gttgcagatcctccgagtcaaaatccaggggtgaaggaaggcaggagccaactcttggag
actgagtacaggaataaccttcttgacgatttgtacgagatcaaagcatttttgagccaa
cgattggctgagttgagaaatggagatactttatccttgcaacatcaagtccagtcagtt
gctcccttggtgctgcagcaatatacccctgatgccattgagacattgttgtctgatgtt
tccttggcaatttccttgctgactaatcggaaaacacgtgacttgatcatgattcttaac
tccaaaaggtttctcgacagattggtaggtacattggaggaaaagaagcatcacgagcag
aagttaaaggaggggttgaaggacttggctgctaaacgcatggaacttcagaattcttta
tcttcatcatggccaaagcaggaagcagctcttgcaaaaaccagggagctgaagaggctc
tgtgagagtacactttcatcaatgtttgacagaaggccagtgaatctaattggcgagatc
aataccttattgaacagtggaattagtgcttga
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