Manihot esculenta (cassava): 110623020
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Entry
110623020 CDS
T05761
Name
(RefSeq) LIMR family protein At5g01460 isoform X1
KO
K14617
LMBR1 domain-containing protein 1
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
110623020
04980 Cobalamin transport and metabolism
110623020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mesc04131
]
110623020
Membrane trafficking [BR:
mesc04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
110623020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LMBR1
DUF7801
Motif
Other DBs
NCBI-GeneID:
110623020
NCBI-ProteinID:
XP_021623525
LinkDB
All DBs
Position
9:complement(30692481..30699731)
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AA seq
509 aa
AA seq
DB search
MGDFNLALIIVAIVVCIIVFIFNVYLLVNYQHPDDKNQAYFPKFVVVLGLSVALISILML
PADVANRQACRRAIYNGACNLTLPMKDLWIAVYIIDALLVFFVIPFAMFYYEGDQDKTIG
QRMKSSLLWVITTAIVCGLLLGILYGLVGKVDFTVMHLSSTTTNFPSSWDFSSNQPCIGS
GVHQCSAYLASPSSEKTWTMRTTFPEYVVALATIVGSVLFSIFGGVGIACLPLGLIFSFI
RRPKAVITRSQYIKEATELGKKAKELKKAADALHQEERSGSKGRKWRKNVKAVEKELLQL
EEDVNLLEEMYPQGEKAETAWALTVLGYLAKLVLGILGLIVSVAWVAHIVIYLLIDPPLS
PFLNEVFIKLDDIWGLLGTVAFAFFCFYLLLAVIAGAMMLGLRLVFITIHPMKWGATLMN
SFLFNVALILLCSISVIQFCATAFGYYAQATAAQEIFGHTLQSLRGIKYLYKYNVFQIAF
IVLAGLTFVYYAAFGWRRKKPSGRFQLSS
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgggcgatttcaatctcgctctaattattgtcgctatagtggtgtgcattattgttttt
atctttaatgtgtaccttcttgtcaattaccaacatccagatgacaagaaccaggcctat
ttccccaaattcgtcgttgttttgggtctatctgtcgccctcatttcaatattgatgtta
ccggcagacgtcgctaaccggcaggcctgtcgccgcgcgatatacaatggcgcatgtaat
ctcactttaccaatgaaagatctatggatcgctgtctatattatcgatgctttgcttgtg
ttttttgttatccccttcgcgatgttctattatgaaggcgaccaggacaagactattggc
caaaggatgaaaagctcgttattgtgggtgataacgacggcaattgtttgcggtctttta
cttggcattctatatgggctagttggaaaggtggacttcactgtcatgcacctctcttca
accactaccaactttcctagtagttgggacttctctagcaatcagccatgcattggaagt
ggcgtgcaccagtgctctgcatatcttgcaagtccttcctcagagaaaacatggactatg
cgcaccacctttcctgaatatgttgttgcgctggctacaattgttggatctgtacttttt
tcgatatttggaggtgttggtattgcttgtttgccactgggacttatattttctttcatc
cggcgtccaaaggctgtcataacccgctcacagtatattaaggaagcaactgaacttggc
aaaaaagcaaaagaattgaagaaagcagctgatgcactccatcaagaagaaagaagtggt
tctaagggtagaaaatggcgtaaaaatgtcaaggctgtagagaaggagttgctccagtta
gaagaagatgtcaacttgttagaggagatgtatcctcaaggagaaaaggctgagacagct
tgggctttgactgttcttgggtacctggcaaaacttgtgttggggatcttagggttgatt
gtttcagttgcttgggtggctcatattgttatatatctactaattgatccacctctttct
ccttttctgaatgaggttttcatcaagttggatgatatatggggtcttctgggtactgtg
gcatttgcattcttctgcttctaccttctgcttgcagtgatagcaggggcaatgatgctg
ggcctgagattagttttcatcacaattcatcccatgaagtggggagccactctaatgaac
tccttccttttcaatgttgcactcattcttctttgctctattagtgtgattcagttctgc
gctacagcatttggctactatgctcaagcaactgctgcacaggagatttttggccacaca
ttacagtctcttcggggaattaaatatttgtacaagtataatgttttccaaatcgcgttt
attgttttagcgggtttgactttcgtgtattatgctgccttcggatggagaagaaaaaag
ccaagtggcagattccaactttcttcctaa
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