Manihot esculenta (cassava): 110623024
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Entry
110623024 CDS
T05761
Name
(RefSeq) transcription elongation factor TFIIS
KO
K03145
transcription elongation factor S-II
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mesc03021
]
110623024
Transcription machinery [BR:
mesc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
110623024
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
Baculo_LEF5_C
HTH_NOL4_2nd
HVO_0758
Motif
Other DBs
NCBI-GeneID:
110623024
NCBI-ProteinID:
XP_021623534
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All DBs
Position
9:complement(32565721..32568828)
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AA seq
342 aa
AA seq
DB search
MERELVELFEAAKKAADSAASDGVSSNGPEVVRCVDALKRLKSFPITYDILVSSQVGKRL
RPLTKHPREKIQTVASDLLEIWKRIVIDETTRKKNGVVDNKSSGKAEVSKVETIKVEKIQ
KSSTVKVDKIDREEIIKVEKISKEEKHASNSKKPSQVPIAPPKLTTMVKCNDALRDKVRE
LLVEALSKVASEVDEDARDEIRACDPIRIAVSVESAMFEKMGRSNGAQKFKYRSIMFNMK
DPNNPDLRRKVLLGLVKPERLITMSPEEMASEKRQQENNQIKEKALFDCERGGGPKATTD
QFKCGRCGQRKTTYYQMQTRSADEPMTTYVTCVNCNNRWKFC
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggaaagagagcttgtagagttgtttgaggccgcgaagaaagccgcagattccgctgct
agtgacggagtttcctccaatggaccggaggtggtgaggtgtgtagatgcgctgaaacgg
ctcaagagttttccgataacgtatgatattctggtatcctctcaggtcgggaagcggctt
cgacctctcacaaagcatcctagggagaagatccaaactgtggcatctgacttgctagag
atttggaaaaggatagtcattgatgagaccaccagaaagaaaaatggtgtcgttgataat
aaaagttcagggaaagctgaggtttcaaaggtagagaccattaaagttgagaagattcaa
aaatcaagcacagttaaggttgataagattgatcgggaagaaataatcaaggttgaaaaa
atatccaaggaggagaaacatgcttctaattcgaagaagccatctcaggtccctattgct
ccaccaaagcttactacgatggtaaaatgtaatgatgctttacgtgacaaagttcgcgaa
cttcttgtggaggccttgtccaaagttgctagtgaggttgatgaggatgcgagggatgaa
ataagggcatgtgacccaatccgaattgctgtatctgtagaatctgctatgtttgaaaag
atgggtcgatcaaatggagcccaaaagttcaagtacagatccataatgttcaacatgaag
gatccaaataaccctgatttgaggagaaaagtacttcttggactggtcaaaccagagaga
ctcatcacaatgagccctgaagaaatggcaagcgaaaagagacaacaggaaaataaccaa
attaaagagaaagcattatttgattgtgagcgtggtggtggaccaaaagccacaaccgat
cagttcaagtgtggtcgatgtggtcagcgcaagaccacttactatcagatgcagactagg
agtgctgatgaaccaatgaccacgtatgtaacgtgtgtaaactgcaacaaccgttggaaa
ttctgctag
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