Manihot esculenta (cassava): 110623051
Help
Entry
110623051 CDS
T05761
Name
(RefSeq) protein SUPPRESSOR OF QUENCHING 1, chloroplastic isoform X1
KO
K28146
NHL repeat-containing protein 2
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99994 Others
110623051
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
Hydrolase
HAD_2
Thioredoxin_8
TEN_NHL
SGL
Redoxin
AhpC-TSA
Thioredoxin
Thioredoxin_2
DUF4934
Hydrolase_like
DUF5128
Arylesterase
HAD
Motif
Other DBs
NCBI-GeneID:
110623051
NCBI-ProteinID:
XP_021623589
LinkDB
All DBs
Position
9:36779003..36794315
Genome browser
AA seq
1084 aa
AA seq
DB search
MKLLSPPASLSRPTSLFFFSPKGPKPISNSVQLFQWRSKGVTFTRRMVVKACVKVEQKEN
SVSEEAGSQWGKVSAVLFDMDGVLCNSEEPSRMAAVDVFAEMGVAVTVEDFVPFMGTGEA
NFLGGVANVKGVKGFSTEAAKKRFFEIYLEKYAKPNSGIGFPGALELITQCKEKGLKVAV
ASSADRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAASKILDVPTSECIVIE
DALAGVQAAEAARMRCIAVKTTLSEETLKNASPSLIRNDIGNISLDDILNGGSDGYNEMM
QRPQVLHTSEQSSAAILKERTDNGALVNNVAASDEVFSAGGFQASRRNILRYGSLGVAFS
CLFFAVSNWKAMQYASPQAIWNLVFGVNKPDFKQNEGKSDLEYSRVQQFVNYISDLETRG
TARVVPEFPTKLDWLNSAPLQFHRELKGKVVLLDFWTYCCINCMHVLPDLEFLEKKYKDM
PFTVVGVHSAKFDNEKDLEAIRNAVLRYNISHPVVNDGDMYMWRELGINSWPTFAIVGPN
GKLIAQVSGEGHRKDLDDLVEAALLYYGGKKLLEGTPIPLGLEKDDDPRLISSPLKFPGK
LAIDGLNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLRDGSFDEAMFNRPQGLAYN
AKKNLLYVADTENHALREIDFVNEMVRTLAGNGTKGSDYKGGGKGTTQLLNSPWDVCYEP
VNEKVYIAMAGQHQIWEHNTLDGVTIAFSGDGYERNLNGSSSTSTSFAQPSGISLSPDLK
EIYVADSESSSIRALDLKTGGSRLLAGGDPIFFDNLFKFGDHDGIGSEVLLQHPLGVLCA
KDGQIYIADSYNHKIKKLDPATKRVSTIAGTGKAGFKDGKALVAQLSEPSGIIEAENGRL
IIADTNNSVIRYIDLNKEEAELLTLELKGVQPPAPKSRSFKRLRRRTSADTQTIKIDGGS
SSEGDLCLKISLPEEYHFSKEARSKFIVETEPENAVLIDPSDGFLSPEGTAILHFRRSSA
SASTGRINSKVYYCKEDEVCLYESLLFEVAFQEETPSSSPSQITLAYVVKPKALTNSLEL
PVSR
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgctatcgcctcccgcttctctatctcgccccacgtctctcttcttcttcagt
ccaaagggaccaaaacccatctcaaattcagttcaactcttccagtggagatcaaaaggt
gtaacttttactcgaagaatggtggtaaaggcatgtgtgaaggtggagcaaaaggagaat
agtgtctccgaagaagcaggaagtcagtgggggaaggtctctgcagtgctttttgatatg
gatggagtgttatgcaacagtgaagagccttctagaatggcagctgtggatgttttcgct
gagatgggagttgcagtcacagtggaggactttgtgccattcatgggcacaggtgaagca
aacttcttaggaggtgtggctaatgttaagggagttaagggattcagtactgaggcagca
aaaaagaggttctttgagatatatctagaaaagtatgcaaaaccaaattctggaatagga
ttcccaggtgcccttgaactcattactcagtgcaaagagaaaggtctcaaagttgcggtt
gcatctagtgctgatcgtatcaaagttgatgcaaatttagcagctgctgggttgccattg
tcaatgtttgatgctatcgtgtcagcagatgcttttgagaatttgaaaccagctcctgac
attttcttggctgcatctaaaatcttggatgtgcccactagtgagtgtattgttattgaa
gatgccctagctggagtacaggctgcagaagccgcacggatgaggtgcatagctgtgaaa
actacactgtcagaagagactctgaagaatgctagtccatcccttatcagaaatgatatt
ggaaatatttcacttgatgatattctcaatggtggatctgatggctataatgagatgatg
cagagacctcaggttctgcatacttctgaacagagttcagcagcaatactcaaagaaaga
acagataatggggcacttgttaataatgttgctgccagcgacgaagttttctcagctggg
gggtttcaggcttctcgccgcaatatattgagatatggaagtttgggtgttgctttttct
tgtctgttcttcgccgtctcaaactggaaggcaatgcaatatgcttcccctcaagctata
tggaatttggtgtttggagttaataaaccagattttaagcagaatgaaggtaagtcagac
ttggaatattcaagagtccaacagtttgtaaactatatatctgatttagaaaccagggga
actgctcgcgttgtaccagaatttccaactaaacttgattggctgaattcagctccactt
caatttcacagggaattgaaaggcaaggtagttctgctggatttttggacctattgttgc
ataaattgtatgcatgtgttgccagatctagagtttctggagaaaaaatacaaagatatg
ccgttcactgttgtgggagtacattcagctaaatttgacaatgagaaagatttagaagca
atccgcaatgcagtcttacgctataacatctctcacccagttgtcaatgatggagatatg
tatatgtggcgtgagctaggtatcaattcatggcctacatttgcgattgttgggcccaat
ggtaagcttattgcacaagtatcaggagaaggccatagaaaggatcttgatgatctggtg
gaggcagctcttctgtattatggtgggaagaaactcctagagggcacaccaattccactg
ggtttggagaaagatgatgatccccgtttgatttcctctcctttgaagtttcctggaaag
ctggcaatcgatgggcttaacaaccggctgttcatttcagatagtaaccataaccgcatt
gtggtcactgatctagatgggaacttcattgtccaaattgggagcagtggagaggaaggt
ttgcgtgatggttcctttgatgaagccatgtttaatcgccctcagggcttggcttacaat
gcaaagaaaaatctactttatgttgcagatactgaaaaccacgctttgagggagattgat
tttgtgaatgagatggtacggactcttgctgggaatggaaccaaaggttctgactataaa
ggtggaggaaaaggaacgactcagcttctcaactctccatgggatgtctgctatgagcca
gtcaatgaaaaagtatatattgcaatggctggacagcatcagatatgggagcacaatact
ctagatggagttactatagctttcagtggtgatggttatgaaagaaacttaaatggatca
agctccactagcacgtcatttgcacaaccttctggaatttcactatctcctgatttgaag
gagatttatgttgctgatagtgaaagtagctccattcgagcccttgatctgaaaacagga
ggatcaaggctgctagctggtggtgatccaattttctttgacaacttgtttaagtttggt
gaccatgatggaatagggtctgaagtgcttcttcaacatccactaggtgtattatgtgca
aaggatggtcaaatatatatagcagatagctataatcacaagataaagaagctagatcca
gctactaaaagagtgagtactatagcagggacagggaaagctggtttcaaggatggtaaa
gccctggttgctcagctttcagagccatctggaatcattgaggctgagaatggaagactt
attatagctgatacaaacaacagtgtcattcgatatatagacttgaacaaggaagaagct
gaattgcttactttggagctgaaaggagttcagcctcctgcacctaaatctcgatccttt
aaacggcttagaagacgaacatctgctgacacacagacaattaaaatagatggtggttct
tctagtgagggagacctttgtctcaaaatatcattacctgaagagtaccatttttcgaag
gaagcacgaagtaaatttattgtcgaaactgagcctgaaaatgcagttctgattgatcct
tcagatggatttcttagtcctgaaggaacagcaatccttcacttcagaagatcctctgcc
tcggcttcaacggggagaataaatagcaaggtctactattgtaaagaagatgaagtctgt
ttatatgaatcccttctgtttgaagtagcatttcaagaggaaactccatcttctagccca
tcacaaatcacccttgcttatgttgtgaagcccaaagcattaacaaacagcttggagctg
ccagttagccgctga
DBGET
integrated database retrieval system
