Manihot esculenta (cassava): 110623155
Help
Entry
110623155 CDS
T05761
Name
(RefSeq) E3 ubiquitin-protein ligase RHF2A isoform X1
KO
K19043
E3 ubiquitin-protein ligase RHF [EC:
2.3.2.27
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mesc04121
]
110623155
Enzymes [BR:
mesc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110623155
Ubiquitin system [BR:
mesc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110623155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
110623155
NCBI-ProteinID:
XP_021623766
LinkDB
All DBs
Position
9:7693388..7698056
Genome browser
AA seq
384 aa
AA seq
DB search
MEEVKKPEIHMTSVAAFVEGGIQDTCEDACSICLEEFCESEPSTVTNCRHEYHLQCILEW
CQRSSECPMCLQALSLKDPTSQELLEGVEQERKFRVASSRNPTIFRHPTLGGFELRHLPV
GASDSDLEERIIQHLAAAAAMGRSHHFSRREGQRNRQSSHGRPHYMVFSTHPGAPSSDHV
SSSMTRVGGENEPATVAVASRSTRIEFHGDEMPQETVQFPPAVTGQSSSVSRSTIISTNR
RGMSFNNRAASHSSSPNEDRGGPSELQSGSFKSRLNAVSIRYRESISRSTRGWKERLFSR
SSSVSDLGSELRREVNAGIASVSRMMECIETRDNRRANRASIPTHSTEYLVAERSNQNSS
HIRRQSTRNESKTPASYGASSASS
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggtcaagaaacctgagattcatatgacatcagttgcagcttttgtggaagga
ggaattcaggatacctgtgaagatgcttgcagcatttgccttgaggaattttgcgaaagc
gaaccttcaacggtgactaactgcaggcatgagtatcacctccagtgcatccttgaatgg
tgtcagagaagctctgagtgtcccatgtgtttgcaagctctcagtctgaaggatcccacg
agtcaagaattgctggagggagtagagcaggagaggaagttcagagttgcttcatctaga
aatcccactatatttcgtcatcctacacttgggggttttgaattacgacatttaccagtt
ggtgcaagtgattctgatcttgaagagcgtataatccagcacttggctgctgcagctgct
atgggaaggtcccaccacttcagtcggagagaaggccaaagaaataggcaatcctcccat
ggtcgtccacactacatggtgttttctacacatcctggtgcaccatcttctgaccatgtt
tcttcctcaatgactcgggtaggaggggaaaatgagccagctactgtagctgtagctagt
cgatcgactcgaattgaatttcatggggatgaaatgccacaagaaactgtgcaatttcct
cctgctgtgacgggccaaagttcatctgtatctcgatctaccatcatttctacaaatcgt
cgaggaatgtcctttaataatcgtgctgctagccattcttcatcaccgaatgaagacaga
ggaggaccatcagaacttcagtcagggtctttcaaatctagactcaatgcagtgtcaata
agatacagagagtctatttcaagaagtacaagagggtggaaggaaaggctgttctctcgt
agcagttcggtgtcagatcttggttctgaactcaggagagaagtgaatgctggaattgcg
agtgtatctcgtatgatggagtgcattgaaaccagagataatagacgagctaaccgagcc
tccataccaactcattcaactgaatatttggttgcagaaaggagcaaccaaaatagtagt
cacattcgcagacagagcactagaaatgaaagcaaaacaccggcttcttatggtgcaagc
tcagcttcttcttaa
DBGET
integrated database retrieval system
