Manihot esculenta (cassava): 110623170
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Entry
110623170 CDS
T05761
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform isoform X1
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110623170
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mesc01009
]
110623170
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesc03019
]
110623170
03036 Chromosome and associated proteins [BR:
mesc03036
]
110623170
Protein phosphatases and associated proteins [BR:
mesc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
110623170
Messenger RNA biogenesis [BR:
mesc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
110623170
Chromosome and associated proteins [BR:
mesc03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
110623170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
ARM_ARMC5
Motif
Other DBs
NCBI-GeneID:
110623170
NCBI-ProteinID:
XP_043816035
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Position
9:complement(10615078..10620386)
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AA seq
489 aa
AA seq
DB search
MLKKIIKGGHKKPSKSDGHDHGFGPPGSGPASNVVVNHASRPSHAPEGPHNGTMVVAPPP
MNSIEILPHFRDVPVSERQHLFLRKLQVCCFQLDFSDTLRSVREKEIKRQTLLELVDFIQ
SGSGKITETCQDGMIRMISVNIFRCLPPAAYENTGQEVSDPEEEEPYLEPSWPHLQLVYE
LLLRYVVSSDTDTKVAKRYIDHCFVLKLLDLFDSEDPREREYLKTILHRIYGKFMVHRPF
IRKAINNIFYRFVYETERHSGIGELLEILGSIINGFALPMKEEHKLFLVRALIPLHKPKP
VSIYHQQLSYCIVQFVEKDYKLADTVIRGLLKFWPLTNCQKEVLYLGELEEVLEATQSAE
FQRCIVPLFRQIARCLTSSHFQVAERALFLWNNEHIVSLIAQNRSEVLPIIFEALEKNIQ
SHWNQAVHGLTVNVRKMFMEMDAELFEECERQYEEKESRAKEVEEQREMTWKRLADVASQ
RGGDGMITV
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagaaaattataaaaggtgggcacaaaaagccctctaaatctgatggtcacgat
catgggtttgggccaccggggtcgggacctgcatcaaatgtggtggttaaccatgcgtct
cggccgtcccatgcccctgaaggtccccacaatggcacgatggtcgtggctccgccgcca
atgaattcgatagaaatccttccacacttccgggatgtgccagtatcagagcgacaacac
ctgtttcttcggaagcttcaggtctgttgcttccaattggatttcagcgatacgctgaga
tcggtgcgagagaaggaaatcaagagacagactttgttggaattggtcgattttattcaa
tccggctcgggaaaaatcactgagacctgtcaagacggaatgattagaatgatttcggtg
aatatattccggtgtttgcccccagctgcttatgagaacaccgggcaagaagtttcagat
cctgaagaggaggagccttatctggaaccatcgtggcctcatttgcagcttgtttatgag
cttcttttaagatatgttgtctcgtcagatacagacacaaaggtcgccaagaggtatatt
gatcattgttttgtgttgaaattgctagatttgtttgattctgaggatcctcgcgagaga
gagtatttgaagacgattcttcataggatttatggcaaatttatggtgcatcgcccattt
attaggaaagcaataaacaatatattttatcggtttgtttatgagactgagaggcacagt
gggataggagaactactggagattctagggagcattataaatggttttgccctgccaatg
aaagaagagcataagctgtttcttgtaagggcgcttataccactgcataaaccaaagcca
gtttctatataccatcagcagctgtcttattgtattgtccagttcgttgaaaaggattac
aagcttgcagatacagttataaggggtttgttgaagttttggcctctgactaattgtcag
aaggaagttctctatcttggagaacttgaagaagtgctggaggcaacacagtctgcagag
tttcaacgctgcatagttcctcttttcagacagattgctcgctgcctcactagctcccac
tttcaggttgcagaaagagccctgtttctgtggaacaatgaacacatcgtgagtttgatt
gctcagaatcgtagtgaggtattaccaattatttttgaggcattggagaagaatatccaa
agtcattggaaccaagctgttcatggacttacagttaatgttcggaaaatgttcatggaa
atggatgcggagttgtttgaagagtgtgagaggcagtacgaagagaaagagtcaagggcc
aaagaagtggaagagcaacgggaaatgacatggaagagactggctgatgttgcatctcag
agagggggagatggcatgatcactgtttaa
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