Manihot esculenta (cassava): 110623212
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Entry
110623212 CDS
T05761
Name
(RefSeq) RHOMBOID-like protein 1
KO
K27605
rhomboid-like protein, plant [EC:
3.4.21.105
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mesc01002
]
110623212
Enzymes [BR:
mesc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
110623212
Peptidases and inhibitors [BR:
mesc01002
]
Serine peptidases
Family S54: Rhomboid family
110623212
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Gene cluster
GFIT
Motif
Pfam:
Rhomboid
DER1
Motif
Other DBs
NCBI-GeneID:
110623212
NCBI-ProteinID:
XP_021623851
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Position
1:35410501..35414971
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AA seq
401 aa
AA seq
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MAVRELAMNGVEVKVHSQRGEYAVQPVASSSKLSPKRSTPSSALPYNNPQHQQYVLSDDS
RPFRRWMSWSVPLFVIANILLFFISMYVNDCPKNSESCTGKFLGRFSFQPVKENPLLGPS
SSTLEKMGALEVDKVVHRHQAWRLISCIWLHAGVFHLLANMLSLVFIGIRLEQEFGFIRI
GLVYVISGFGGSLLSALFIQLGISVGASGALFGLLGGMLSELITNWTIYANKLAALMTLV
LIIVINLAVGILPHVDNFAHIGGFLSGLLLGFVLLIRPHFGWVKRKACPPGYIAPPAKSR
HRTYQYVLWVVSLILLIFGFTSGMVALLRGVDLNNHCSWCHYLSCVPTSLWSCNSQKAYC
QSSQIGNQFNLTCLSNGKSHTYQLSDISSSHVQQLCSQLCS
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgagagagctggctatgaatggtgtggaagtcaaggtgcattcccagcggggg
gaatacgctgtgcaaccggtggcctcatcttctaagttgtcgcccaaaagatcaactccg
tcatcagcattgccttataataatccgcagcaccagcaatatgttttatccgacgattcc
aggccgttcaggcggtggatgtcatggtcggttccactttttgtgatagctaatattctt
ctattctttatttcaatgtatgtcaatgattgccccaagaactcggaatcttgtactggc
aagtttcttgggagattctcgttccaacccgtcaaggaaaatccccttcttggtccttcc
tcttccacgttagagaagatgggagcgctggaggtggataaagtggttcatcggcatcaa
gcttggcgcctcatttcttgcatatggttgcacgctggtgttttccatttacttgctaac
atgttgagtcttgtatttattggaattcgccttgagcaagaatttgggtttattcgaatt
ggattggtctatgtcatttctggttttggtgggagtttgttgtcggctctttttattcag
ttgggtatctctgtcggtgcctctggtgcactttttggcctactaggaggcatgctctca
gagctgatcacaaactggaccatatatgcaaataagttggcagcactaatgactcttgtt
ttgataattgtaataaatttagcagttggaatccttccacatgtagacaattttgcccat
attggaggatttctttctggtttgcttcttggatttgtgttattaattcggccccatttt
gggtgggttaaacgaaaggcttgtcctcctggatacattgcacctccagctaaatctaga
cacaggacatatcagtatgtattatgggttgtctctctgatactactgatttttggattt
acatctgggatggttgcactccttcgaggagtagatttgaataatcactgttcttggtgt
cattatttgagctgtgtccctacttcactatggagctgcaactcgcagaaagcctattgt
cagtcaagccaaattggaaatcaattcaacttgacatgcctgagcaatgggaaaagtcac
acctatcaactctcagatatttcgtcttcccatgttcagcagttatgctctcagctctgc
agttaa
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