Manihot esculenta (cassava): 110623400
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Entry
110623400 CDS
T05761
Name
(RefSeq) Fanconi anemia group D2 protein homolog isoform X1
KO
K10891
fanconi anemia group D2 protein
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
110623400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mesc03400
]
110623400
DNA repair and recombination proteins [BR:
mesc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
110623400
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FancD2
FANCI_S2
Motif
Other DBs
NCBI-GeneID:
110623400
NCBI-ProteinID:
XP_021624023
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All DBs
Position
9:complement(15972811..16031588)
Genome browser
AA seq
1503 aa
AA seq
DB search
MVFLRHQFPSRKRPSSASFISPLPEPKIPKTTATGSPPSSENNCVEEDVPAVAIDKMVSI
LADAGCTLINPSGPPCLPSDPLKLRSHLDRLFSASHEGRALRSHFLAGFSSFIDSPKNLR
RVLVASNQCGGRSESLMRQLLLVPAIQLDLQILILEKIPEYFDVDPDCSLEDDVARLIIN
HFRWLDFMVDCSAFLEKLMQVLLICPLHFKKEIIGSLPEIIGDQSNKAVFDSLGQMVRED
SSIIMSVLDCFSNLNLDDILQEQVITIAISYIKTIDGEHMPHLLRFLLLNATPLNVRRIV
LHIREQLKFIGTSHAMQHKKLKGKSLMASTEASILDALRTGLLSKSMLCQEILKVLISLE
KPQDHKITDLWLLVLIYMNGKSMKKSIEKIFRKKVVENCIQKVMIDQCICGNRELVQDYF
PPFLSLSEYFLTCREQKARDFGTHIYMCLFGEFGDTYCRQEVLSSLVTHVGSGVSFEVTS
ALETMAFMASKYAQELIPLSTHINGILDYLEAFNIENLHKVYEIFSHLALLARSSEECFG
SSFGNELLMILRKQVNHPDLKYKKMGLIGTLKVVSCLADVTKVSGTSFEKTNCQEALELL
RTSLDSSKHFCLPLILFYDELTVMLEHKRLQPEIIEWIAKHIGEFESMFLSDLDGGQLHS
ADAYGGLEGELWMNLDGDISPVCLSIFPLASSSLQSTTSLQVLPAYFLLLSVVERLTNQG
SLGGIDALLGCPLHLPASKYFSVAGWQSLTAKQKQIVCLSLYYAINWIRELLNAFCTQVA
RGFECISQVTKEDIIAKLLKRLRNLVFLESLLNNSIRSHPMSLPELHLHVQHSGTSLFDN
AYDMMHAEINNKHKKTHDTISPNKNRHNKVSTQSSSGTNRKLQQPTIFEMLRKGGAVSSK
QLVHEDSSGQPLKSLNSADQESDSTEQLILEVPAASKALNAQRCKFRPLLMQCFSLLEFS
KKQDSCCSDPTAELPVYLYLLSDLHNKVDYFTPTKQFSSRCTNPGPGFCRMAVKEFLTKI
RPLFPNLRRHFDRAVSILKEEGTQSHKYEQIISGDEHCEEHWKVHSSLAGNPEIAKLGIS
NYSMSVSVSKEILHCFSKMLNLPEVQGEKTILSDLLEAFQPSKISEIVFSDIQPRPLPGT
MEYLYLGAASFLEDVLSKACSSSFTLASECLFTLESIVASVQIFLNKLERNVESTHPISI
DRILPTLQSILGTSAQKLLQHKWDDMSLENGWKNKGEIMQKILFIYMENSESKSDLLDEL
ACSILPEVPSCKTMTEHDNHGFSTLCNETFAMWYRVMHEENLAILNSLVKDVILRKTGAG
VQLEMVENHLIKIQRSVNVVVSLVSTCRTHDKVIVRAMAVKYGGKFVDSFLKVFEFLQAH
FRTHSEIIIQLVKELQKATRTIQTLCSEAKGSKQIAITSKIPPTKRSIERFLFHVKALLH
TTPTACTFWMGNLKHKNLRGEVVSSQVYADDQNSNSNADEDLAEAEDSDQPVNIGSEEDK
DIE
NT seq
4512 nt
NT seq
+upstream
nt +downstream
nt
atggtattcctccgccatcaattcccttcccggaaaagaccttcctctgcgtcctttata
tcccctctcccggaacccaaaatccccaaaaccaccgccaccggatcaccaccatcttca
gaaaacaattgtgttgaggaggatgttccagctgtagcaattgataagatggtatctatt
ctggcagatgcaggctgtacgctgataaatccctccggtccaccctgccttccttccgat
cccttgaagctccgctctcatctcgaccgcttattctcggcttcccatgaaggccgtgcc
ctgcgctcccatttccttgctggtttctcctctttcattgactcccccaaaaatctccgt
agggttttggttgcttcaaatcaatgtggcggcagaagtgagagcttaatgcgacaactt
ttgctggtcccggccatccaattggacctccagatattgattctcgagaaaattcctgaa
tatttcgatgtcgatccagattgttcgctcgaggatgatgttgcacggcttataattaat
cattttcggtggcttgattttatggtggattgtagtgccttcttagaaaaattgatgcaa
gttctcttgatttgccctttacactttaagaaagagattattggatccttgccggagatt
attggtgatcaaagcaataaggctgtgtttgattcccttggacaaatggtccgagaagac
tcttctatcatcatgtctgtgcttgactgtttttcaaaccttaatttggatgacatcttg
caagaacaggttattaccatagcaatatcgtacattaaaacaattgacggggagcacatg
cctcatttgctaagattcttgctgcttaacgcaacacctctaaatgttcgaagaatagta
ttgcatattcgtgagcagcttaagtttataggaacatctcatgcaatgcagcacaaaaaa
ctcaaaggaaaatcacttatggccagtacagaggcatctattcttgatgcgttaagaact
ggtcttctatctaagagtatgctatgtcaggagattttgaaagtattgattagtcttgag
aagcctcaggatcacaagatcacagacttgtggcttcttgtgttgatatacatgaatggc
aagtccatgaaaaagagcatcgagaagatatttaggaagaaagttgttgaaaattgtatt
cagaaagttatgattgaccagtgtatttgtggaaacagggaattggtacaggattatttt
ccaccatttctttctttgtcggagtacttcttgacatgtagagagcagaaggcaagggat
tttggaactcacatttacatgtgcttatttggagagtttggtgatacttactgtagacaa
gaagttcttagttcactggtaactcatgtcggttctggagttagctttgaagtgacttct
gctttggagaccatggctttcatggcctccaagtatgcccaagaattaattccactttct
actcatataaatggtatattggattacttggaggcttttaacattgaaaatctacacaag
gtgtatgaaattttcagccacctagcattgttggctcgatctagtgaggaatgttttggg
tcttcttttggaaatgaacttttaatgatactacggaaacaggtcaaccatcccgatttg
aagtacaaaaagatgggtttaattggaactctgaaagtagtatcttgtcttgcagatgtg
actaaagttagtggtacatcatttgagaaaaccaactgtcaggaggctttggaactctta
agaacatctctggattcttccaagcatttttgcttaccactgatccttttttatgacgaa
ctaactgtaatgctagaacataaaagacttcagccagaaattattgaatggattgccaaa
catattggagaatttgaatctatgtttctttctgatcttgatggtgggcaattgcatagt
gcagatgcatatgggggtttagaaggggaactgtggatgaatctggatggagacatatct
cctgtttgtttgagtatctttccattggcctcctcttccttacagtctacaacttcttta
caagttctccctgcatactttctcttactttcagttgtggagaggttgacaaatcaggga
tctcttggtggaattgatgcattgctaggctgccctttacaccttcccgcatctaagtac
ttctctgtagcaggctggcagtcactgacagcaaagcagaaacagattgtttgcctttct
ctttattatgcaatcaactggataagagaactgcttaatgctttctgtacacaagttgct
cgaggatttgaatgcatcagccaagtgacgaaggaggatataattgccaaactattgaag
cgattgaggaatctagtatttctggaaagcttgttaaataattccattcgaagccaccct
atgtctctaccagagctacatcttcatgtgcagcattctggaacttcactctttgataat
gcctatgatatgatgcatgcagaaattaacaataagcataagaaaacacacgataccata
tctccaaacaagaacagacataacaaagtctcaactcaatcaagttcaggtacaaatagg
aaactccagcagccaacaatttttgaaatgttaaggaaagggggagctgtaagcagcaaa
cagcttgtacatgaggattcttctggccaacctttgaagtcactcaattctgcagatcaa
gaatcagattctactgaacagctaattttagaagttccagcagcttccaaggctttgaat
gcacagagatgtaaattcaggcctctactgatgcaatgcttctcccttttggaattttca
aagaagcaagactcctgttgttctgatcctacagccgagttacccgtatatttatacctt
ttgagtgatcttcacaacaaggtggattacttcactcctacaaagcaattctcatccaga
tgcacaaatcccggtcctggtttctgtagaatggctgtgaaagaattcttgaccaaaatt
agaccacttttcccaaatctcagaaggcattttgatagagcagtttctattcttaaagaa
gaggggacacaatcacacaaatatgagcaaatcatatcaggtgatgaacattgtgaagaa
cattggaaggtgcattcttcacttgctggcaatccagagatagccaagcttggaatttca
aactattctatgtctgtttcggtatctaaggaaatacttcattgttttagtaagatgtta
aaccttcctgaagttcaaggggaaaaaacaattctctcagatctactggaagctttccag
cccagcaaaatatctgagattgttttctctgacatacaacctaggcctttacctgggaca
atggagtatttatatttaggtgctgcttcatttttagaagatgtgttgagtaaagcatgt
tcatcgtcctttacgttggcttcagagtgtctttttaccctagaatcaattgttgcctca
gtccagatattccttaataagttggagaggaatgttgaaagtacgcacccaatatccatt
gataggatccttccaactttgcagagcatacttggaacttcagcccaaaagcttctgcag
cacaagtgggatgatatgagcctagagaatggttggaaaaacaaaggagaaatcatgcaa
aagatattatttatttacatggagaatagtgagtccaagtctgatttgctggatgaactg
gcttgctccattttgcctgaggttccgtcttgcaaaacaatgaccgagcatgataatcac
ggtttttcgactttgtgcaatgaaacttttgctatgtggtatcgtgtgatgcatgaagag
aaccttgctattcttaacagcttggttaaggatgtcattctcaggaaaactggagctggt
gttcagcttgaaatggttgaaaaccatttgatcaaaatacaaagatctgtgaatgtggtg
gtttccttggttagtacgtgcaggactcatgacaaggtaattgtgcgtgccatggctgtc
aaatatggtgggaagtttgtcgattcgttccttaaagtgtttgagttcttacaggcccac
tttcgaacacacagtgagattataatccaattggtgaaggagcttcaaaaggccacaaga
acaatacagacactatgctctgaagcaaagggctcgaaacaaattgctatcactagcaaa
attcctccaacaaagcgatctatagaacgtttcttgttccatgttaaggctcttcttcat
acaacaccgactgcctgtactttttggatggggaatcttaaacataaaaacttgaggggt
gaagtagtaagctcccaagtttatgcggacgatcaaaattcaaattctaatgctgatgaa
gatttggcagaagctgaagatagtgatcagcctgttaatattggtagtgaagaggacaag
gacattgaatga
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