Manihot esculenta (cassava): 110623434
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Entry
110623434 CDS
T05761
Name
(RefSeq) F-box/LRR-repeat protein 3
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mesc04121
]
110623434
Ubiquitin system [BR:
mesc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
110623434
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_At1g61320_AtMIF1
F-box_5
LRR_RPS2
F-box
F-box-like
Motif
Other DBs
NCBI-GeneID:
110623434
NCBI-ProteinID:
XP_021624068
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All DBs
Position
9:complement(31516733..31520529)
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AA seq
672 aa
AA seq
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MKRQKMTVEFDDNCNKSNNLFDLLSEEIVFAILDFLDTNPLDRKSFSLVCKSFYSLEYNH
RKTLKPLRQEHLPRILSRYPHVSHLDLSLCPRINDNSLTVISNTCKDSLRSIDLSRSRFF
SYNGLMSLALNCKNLVEIDLSNATELRDAAAAAVAEAKNLERLRLGRCKLITDMGIGCIA
VGCKKLRLISLKWCLGVTDLGVELIALKCKEIRILDLSYLPITNKCLPSILKLQNLEDLV
MEGCFGIDDDSLAVLKDGCKSLKTLDMSSCQNISHVGLSSLISGAGGLEELTLAYGSPVT
PALANSLRSLSALQSVKLDGCIVTTDGLKAVANCVVSLRELSLSKCLGVTDEGLSYLVTK
HRELRKLDITCCRKITDVSIAYITSSCANLTSLRMESCSLVPREAFVLIGQRCQFLEELD
LTDNEIDDEGLKSISRCSKLSSLKLGICLNISDEGLAYIGMNCSKLTELDLYRSAEITDS
GILAIASGCHELEVVNMSYCRDITDSSLISLSKCAKLNTFESRGCPLITSLGIAAIAVGC
KQLSKLDIKKCHNIDNTAMLPLAHFSQNLRQIILSYSSVTDVGLLSLASISCLQNLTVLH
LKGLTRSGLVAALLACRGLTKVKLHVAFKSLLPQALFEHLEARGCVFEWRDKEFQAELDP
KCWKLQLEDMIP
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaggcagaagatgactgttgaattcgatgacaactgcaacaagagcaacaacctc
tttgatctcctctctgaagagattgttttcgctattctggacttcctcgacaccaaccca
cttgatagaaagtcgttttctttagtttgcaagtcgttttacagtctagaatacaatcat
cgcaaaactcttaagcctctccgccaagaacacctcccaagaatcctcagcagataccca
catgtctcccacctcgatctctccctctgtcctcgaattaacgataattctcttacggtc
atctcgaatacctgcaaggattcgctgaggtctattgatctttcgcgctctaggttcttt
tcctataatgggttgatgagtttggctttgaattgcaagaatttggtcgaaatcgacttg
tcgaacgcgacggagctgagagatgcggcggctgcagcggtagcggaggccaagaatctg
gagaggcttcggctggggaggtgcaagttgattacggatatgggtattgggtgtattgcc
gttgggtgcaagaagctaagattaattagcttgaaatggtgtttgggtgttactgatctg
ggagttgaattgattgctctcaagtgtaaggagattaggattttggatctctcttatttg
ccgatcacaaataagtgtttaccttccattttgaaactccaaaatcttgaagatctggtc
atggaaggatgctttgggattgatgatgatagccttgcagtcctcaaagacggttgcaag
tcactgaagacacttgatatgtcaagttgtcagaacattagtcatgtcggtttgtcttct
ctgatcagtggtgctggaggtttggaggagctgaccttagcatacggctctccagtcaca
cctgcgcttgctaatagtctgagaagtctttcagcattgcaatctgtcaaactagatggt
tgcatagttaccactgatggattgaaggctgttgcaaattgtgttgtatcattaagggag
ctgagcctaagtaagtgcttaggagtgacagatgaaggtctctcctatcttgtaacaaag
cacagagagttgaggaagctagacatcacatgctgtcgcaagataactgatgtatctatt
gcatacattacaagttcatgtgcaaacctcacttccctaagaatggaatcgtgttcgttg
gttcctagagaagcatttgtactgattggacaacgatgccagtttcttgaggagcttgat
ttaacagataatgagatagatgatgaaggtctgaagtcgatttctagatgttccaaactc
tccagcttgaaattaggaatttgcctaaacataagtgatgaaggacttgcttatattggc
atgaactgctcaaaacttactgagctcgacttatacagatctgctgaaataacagattca
ggaattttggcaattgcttctggttgccatgagttggaggttgttaatatgtcctactgc
agagatattaccgatagttcattgatatcactgtcaaaatgtgcgaaattaaacaccttt
gaaagtcgaggatgtcctttgatcacatctttgggtatagcagccattgctgtcgggtgt
aagcaactaagtaagttagacataaagaagtgtcacaatattgataatactgcaatgctt
ccacttgctcacttttcacaaaacctcagacagatcattttatcatatagctcagtcaca
gatgtggggctcttgtccctcgctagcatcagctgcctgcaaaacctgactgtcttgcac
ttgaagggcttgacacgaagcggattggtagctgccttattggcatgcagaggactaaca
aaagtgaagctgcatgtagcttttaaatcactgcttcctcaagcacttttcgagcattta
gaagcacgcggatgtgtgttcgaatggagagacaaagaattccaggctgaattggatccc
aagtgctggaaactgcagttggaagatatgattccgtga
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