Manihot esculenta (cassava): 110623475
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Entry
110623475 CDS
T05761
Name
(RefSeq) 26S proteasome regulatory subunit 6B homolog isoform X1
KO
K03063
26S proteasome regulatory subunit T3
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
110623475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
mesc03051
]
110623475
Proteasome [BR:
mesc03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
110623475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_16
AAA_5
AAA_2
AAA_22
DUF815
RuvB_N
nSTAND3
NPHP3_N
AAA_28
AAA_lid_3
TIP49
RNA_helicase
Sigma54_activat
AAA_14
Mg_chelatase
IstB_IS21
AAA_24
TsaE
AAA_18
AAA_7
Parvo_NS1
DUF3450
AAA_30
NTPase_1
AAA_3
AAA_11
ATPase_2
NACHT
DUF5906
AAA_33
NB-ARC
AAA_25
ATPase
DUF6570
ABC_tran
AAA_19
AAA_17
Motif
Other DBs
NCBI-GeneID:
110623475
NCBI-ProteinID:
XP_021624128
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Position
9:459724..476382
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AA seq
463 aa
AA seq
DB search
MASSAMVVDPKPTLELPPSIPALRLDLQQAFADLSNAEEDDLYSRLKSLQRQLEFIDIQE
EYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVEQNNGIVGSTTGSNYYVRILST
INRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIR
EAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQK
YLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDG
FDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTSKMNLSDEV
DLEDYVYRPDKISAAEDFCSWSQTVPVFFVTNSEFGPQTEIQPVPLLPHFALEPPAKVII
AAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTNFEFYK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcatcagcaatggttgtggaccccaagcccacattggaacttcctccatcgatc
cctgctttgagattggacctccaacaagctttcgcggacctatccaacgccgaggaagac
gacctctacagccgcctaaagtcccttcagcgtcagctcgagttcatcgatattcaagaa
gagtatgtcaaagacgagcaaaagaatttgaagcgtgagcttctccgtgctcaggaagag
gtcaagcggattcagtcggtgccgctcgttattggccagttcatggagatggtcgaacaa
aataatggtatcgtgggctccaccactggctctaattactacgtgagaattcttagcacc
atcaatagggagctcttgaagccctctgcttcagtcgctctgcaccggcattccaatgcc
cttgtggatgtgttacctcctgaggctgattccagtatttctctactcagccagtcagag
aaacctgatgtcacttacaatgacattggaggatgtgacattcaaaagcaggaaatccgt
gaggcagtggagttgccgcttactcaccatgaactatacaaacaaattggaatagatccc
ccccgtggtgtcttgctttatggtccccctggcactggaaaaaccatgcttgccaaggct
gttgctaatcatacaacagcggcttttattagagttgttggctctgagtttgttcagaag
tatttgggtgagggcccccgtatggttcgtgacgtttttcgccttgctaaggagaatgcc
cctgcaattattttcatcgatgaggtagatgctattgctactgctaggtttgatgctcaa
actggagctgacagagaagttcaacgaatcttgatggaacttctgaatcagatggatggc
tttgaccaaacagtcaatgttaaggtcataatggcaacaaatcgtgcagacactttggac
cctgcgcttcttcgtcccggtagacttgaccgaaaaattgaatttccattgcctgataga
cggcaaaagaggcttgttttccaggtctgcacttctaaaatgaatctcagtgatgaggta
gacttggaggattatgtttatcggccagataaaatcagtgctgctgaggacttctgctca
tggtcccaaacggttcctgtgtttttcgtgacaaactctgaatttgggcctcaaaccgag
attcagcctgtgccactcttgcctcattttgcgcttgaacctcctgcaaaagtgattatt
gcagctatttgccaggaagcaggcatgcatgcagttcgcaagaataggtatgtcatactc
cctaaagactttgagaagggttaccgaaccaatgtgaagaagcccgacaccaactttgaa
ttctacaaatga
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