Manihot esculenta (cassava): 110623574
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Entry
110623574 CDS
T05761
Name
(RefSeq) cell division cycle 20.2, cofactor of APC complex
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110623574
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mesc04121
]
110623574
03036 Chromosome and associated proteins [BR:
mesc03036
]
110623574
Ubiquitin system [BR:
mesc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
110623574
Chromosome and associated proteins [BR:
mesc03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
110623574
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
WDR55
EIF3I
Beta-prop_IFT140_1st
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
Ge1_WD40
Beta-prop_IFT122_1st
RMC1_N
Beta-prop_SCAP
CFAP43_N
Beta-prop_IFT80_2nd
Motif
Other DBs
NCBI-GeneID:
110623574
NCBI-ProteinID:
XP_021624261
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All DBs
Position
9:complement(7530490..7532785)
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AA seq
449 aa
AA seq
DB search
MDSRFMFSSTKIQSRSPLQRKNSSENLDRFIPNRSAMDMDYAHYMLTEGRKGKDKPAVWS
SPSSEPYQKLLADTFNITSGRRILAFKNKAPAFVNPIPQELLSSVRQPKIVKAWRHIPQS
PERTLDAPDLVDDFYLNLLDWGSSNVLAIALGDTVYLWDASIGNTSELVTVNSEDGPVAS
ISWAPDGCHIAIGLSNSDVQIWDCNNLQHVRTLRGGHQLRVNSLAWNNHILTTGGMDAKI
INNDVRVREHIIETYRGHHQGVCGLKWSASGQQLASGGNDNLLFIWDRSMASSNSPMQWL
HRLEDHRAAVKALAWCPFQSNLLASGGGGADMCIKFWNSHTGSCLNSVNTGSQVCALLWN
KHERELLSSHGFTENQLILWKYPSMVKMSKLTGHTSRVLFMTQNPDGYTVATAAGDETLR
FWNVFGNPKVAKHASKANPEPFAHISRIR
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggattcaaggtttatgttttcttctaccaagattcaatcccgaagccctcttcagaga
aaaaactctagcgaaaatttggatagatttataccgaatcggtcagcaatggacatggat
tatgcacattacatgctgacagaaggaaggaaaggcaaggataagcccgctgtctggagt
tcaccgtccagcgagccataccagaagttgctggcggacaccttcaatatcacctccgga
agacgcattttggcattcaagaacaaggcgcctgcttttgtgaacccaattccgcaagag
ctcttgtcatcagttcgtcagcctaaaattgtcaaggcctggcgccacattcctcagagt
ccagagaggacactggatgcgccagacctggtggatgatttctacttgaatttactcgac
tggggtagcagcaatgtccttgcaattgctcttggagacactgtatacctatgggacgct
tcaattgggaatacctctgaacttgtcactgttaatagcgaagatggtcctgttgctagc
atcagctgggccccagatgggtgtcacattgcaattggcttgagcaattccgatgttcag
atatgggactgcaataatctacagcatgtacgaacattaagaggtggccaccaattacga
gtaaattccctggcctggaacaatcacattcttactactggaggaatggatgcaaaaatc
atcaataatgatgtgagagtaagagagcacattattgaaacatataggggacaccaccaa
ggagtttgtgggctaaaatggtcagcttcaggccagcagttagcaagtggtgggaatgat
aatcttcttttcatatgggatagatcaatggcctcttcaaattcaccaatgcaatggctt
cacaggcttgaagatcacagagctgcagtgaaggcccttgcttggtgtcccttccagagc
aatcttctggcttctggtggaggtggggctgacatgtgtattaaattctggaacagccat
actggttcttgcttgaattcagtgaatactggctcacaggtctgtgctctcctgtggaat
aagcatgagcgtgagttgctcagctctcatggttttacagagaatcagctcattctgtgg
aaatatccgtcaatggtgaagatgtctaagctcactggccatacatctagagtcctcttc
atgactcagaacccagatggatacacagtggcaactgctgctggggatgagaccctgcgt
ttttggaatgtgtttggaaacccaaaagtggctaaacatgcatccaaagctaatcctgaa
ccgtttgctcatatatctcgcatccgttga
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